Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Gm13823-201ENSMUST00000119930 345 ntBASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Gm27430-201ENSMUST00000184585 107 ntBASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Gm44333-201ENSMUST00000197168 107 ntBASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4Q8BQZ5 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Gm13223-201ENSMUST00000118609 747 ntBASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Gm28630-201ENSMUST00000187806 498 ntBASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4Q8BQZ5 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cpsf4Q8BQZ5 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4Q8BQZ5 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4Q8BQZ5 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4Q8BQZ5 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.55□□□□□ -0.24
Cpsf4Q8BQZ5 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4Q8BQZ5 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4Q8BQZ5 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4Q8BQZ5 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4Q8BQZ5 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cpsf4Q8BQZ5 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.55□□□□□ -0.24
Cpsf4Q8BQZ5 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.55□□□□□ -0.24
Cpsf4Q8BQZ5 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4Q8BQZ5 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4Q8BQZ5 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Cpsf4Q8BQZ5 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4Q8BQZ5 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4Q8BQZ5 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4Q8BQZ5 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4Q8BQZ5 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4Q8BQZ5 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Cpsf4Q8BQZ5 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.55□□□□□ -0.24
Cpsf4Q8BQZ5 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4Q8BQZ5 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms