Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Gm12882-201ENSMUST00000121696 517 ntBASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Mir3113-201ENSMUST00000175478 76 ntBASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Mir8117-201ENSMUST00000184773 107 ntBASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2bQ8BJF9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Gm11025-201ENSMUST00000140773 466 ntBASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Gm17271-201ENSMUST00000165535 355 ntBASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2bQ8BJF9 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Gm27741-201ENSMUST00000185060 237 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms