Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 Gm2756-201ENSMUST00000195851 400 ntBASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Gm13365-201ENSMUST00000121188 973 ntBASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Gm27397-201ENSMUST00000184997 107 ntBASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc40Q8BI79 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Mir6990-201ENSMUST00000183724 91 ntBASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc40Q8BI79 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc40Q8BI79 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.58□□□□□ -0.07
Ccdc40Q8BI79 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms