Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ubp1Q811S7 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.8□□□□□ -0.2
Ubp1Q811S7 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Gm33320-201ENSMUST00000192232 530 ntBASIC13.8□□□□□ -0.2
Ubp1Q811S7 Gm9229-201ENSMUST00000222777 126 ntBASIC13.8□□□□□ -0.2
Ubp1Q811S7 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubp1Q811S7 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubp1Q811S7 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.79□□□□□ -0.2
Ubp1Q811S7 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Gm8584-201ENSMUST00000171982 758 ntBASIC13.79□□□□□ -0.2
Ubp1Q811S7 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Gm27306-201ENSMUST00000183970 107 ntBASIC13.79□□□□□ -0.2
Ubp1Q811S7 Mir7023-201ENSMUST00000185093 64 ntBASIC13.79□□□□□ -0.2
Ubp1Q811S7 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Gm7775-201ENSMUST00000218871 853 ntBASIC13.79□□□□□ -0.2
Ubp1Q811S7 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubp1Q811S7 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubp1Q811S7 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.78□□□□□ -0.2
Ubp1Q811S7 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Gm6754-201ENSMUST00000117124 913 ntBASIC13.78□□□□□ -0.2
Ubp1Q811S7 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Gm27321-201ENSMUST00000185021 205 ntBASIC13.78□□□□□ -0.2
Ubp1Q811S7 Gm43703-201ENSMUST00000200523 763 ntBASIC13.78□□□□□ -0.2
Ubp1Q811S7 Gm44608-201ENSMUST00000206827 855 ntBASIC13.78□□□□□ -0.2
Ubp1Q811S7 Gm19324-201ENSMUST00000213229 1169 ntBASIC13.78□□□□□ -0.2
Ubp1Q811S7 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms