Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Shank2Q80Z38 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Shank2Q80Z38 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
Shank2Q80Z38 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Shank2Q80Z38 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shank2Q80Z38 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Shank2Q80Z38 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Shank2Q80Z38 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Shank2Q80Z38 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shank2Q80Z38 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Shank2Q80Z38 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Shank2Q80Z38 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.71■□□□□ 0.43
Shank2Q80Z38 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Shank2Q80Z38 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Shank2Q80Z38 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank2Q80Z38 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Shank2Q80Z38 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Shank2Q80Z38 Gm12566-201ENSMUST00000121479 359 ntBASIC17.7■□□□□ 0.42
Shank2Q80Z38 Gm16479-201ENSMUST00000121706 932 ntBASIC17.7■□□□□ 0.42
Shank2Q80Z38 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC17.7■□□□□ 0.42
Shank2Q80Z38 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC17.7■□□□□ 0.42
Shank2Q80Z38 Gm5523-201ENSMUST00000180415 997 ntBASIC17.7■□□□□ 0.42
Shank2Q80Z38 Mir7032-201ENSMUST00000185154 79 ntBASIC17.7■□□□□ 0.42
Shank2Q80Z38 AC154595.3-201ENSMUST00000224579 384 ntBASIC17.7■□□□□ 0.42
Shank2Q80Z38 CT025533.2-201ENSMUST00000228715 1248 ntBASIC17.7■□□□□ 0.42
Shank2Q80Z38 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank2Q80Z38 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank2Q80Z38 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.7■□□□□ 0.42
Shank2Q80Z38 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank2Q80Z38 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank2Q80Z38 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank2Q80Z38 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank2Q80Z38 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank2Q80Z38 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC17.7■□□□□ 0.42
Shank2Q80Z38 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank2Q80Z38 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank2Q80Z38 Abhd6-203ENSMUST00000225234 1958 ntBASIC17.7■□□□□ 0.42
Shank2Q80Z38 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank2Q80Z38 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank2Q80Z38 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank2Q80Z38 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank2Q80Z38 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank2Q80Z38 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Shank2Q80Z38 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank2Q80Z38 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Shank2Q80Z38 Gm14608-201ENSMUST00000120030 1553 ntBASIC17.69■□□□□ 0.42
Shank2Q80Z38 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank2Q80Z38 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.69■□□□□ 0.42
Shank2Q80Z38 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank2Q80Z38 Gm11637-201ENSMUST00000120601 592 ntBASIC17.69■□□□□ 0.42
Shank2Q80Z38 Gm12363-201ENSMUST00000122250 668 ntBASIC17.69■□□□□ 0.42
Shank2Q80Z38 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Shank2Q80Z38 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
Shank2Q80Z38 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank2Q80Z38 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shank2Q80Z38 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC17.69■□□□□ 0.42
Shank2Q80Z38 CT009718.3-201ENSMUST00000221116 367 ntBASIC17.69■□□□□ 0.42
Shank2Q80Z38 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank2Q80Z38 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank2Q80Z38 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Shank2Q80Z38 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank2Q80Z38 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Shank2Q80Z38 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Gm12201-201ENSMUST00000120657 1234 ntBASIC17.68■□□□□ 0.42
Shank2Q80Z38 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.68■□□□□ 0.42
Shank2Q80Z38 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shank2Q80Z38 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shank2Q80Z38 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shank2Q80Z38 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shank2Q80Z38 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Shank2Q80Z38 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms