Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Gm24158-201ENSMUST00000175263 71 ntBASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Gm2445-201ENSMUST00000182798 989 ntBASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc116Q80X53 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Gm15693-201ENSMUST00000120470 637 ntBASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Gm27702-201ENSMUST00000184512 56 ntBASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Gm10253-201ENSMUST00000194270 940 ntBASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Gm5312-201ENSMUST00000203728 547 ntBASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc116Q80X53 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms