Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ush1gQ80T11 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ush1gQ80T11 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ush1gQ80T11 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ush1gQ80T11 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.27■□□□□ 0.03
Ush1gQ80T11 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ush1gQ80T11 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ush1gQ80T11 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ush1gQ80T11 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ush1gQ80T11 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ush1gQ80T11 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ush1gQ80T11 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ush1gQ80T11 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ush1gQ80T11 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ush1gQ80T11 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ush1gQ80T11 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ush1gQ80T11 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ush1gQ80T11 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ush1gQ80T11 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.27■□□□□ 0.03
Ush1gQ80T11 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ush1gQ80T11 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.27■□□□□ 0.03
Ush1gQ80T11 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1gQ80T11 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1gQ80T11 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1gQ80T11 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.26■□□□□ 0.03
Ush1gQ80T11 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1gQ80T11 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1gQ80T11 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1gQ80T11 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.26■□□□□ 0.03
Ush1gQ80T11 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.26■□□□□ 0.03
Ush1gQ80T11 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.26■□□□□ 0.03
Ush1gQ80T11 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1gQ80T11 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1gQ80T11 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.26■□□□□ 0.03
Ush1gQ80T11 Gm21470-201ENSMUST00000187680 696 ntBASIC15.26■□□□□ 0.03
Ush1gQ80T11 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1gQ80T11 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1gQ80T11 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1gQ80T11 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1gQ80T11 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1gQ80T11 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.26■□□□□ 0.03
Ush1gQ80T11 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ush1gQ80T11 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1gQ80T11 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1gQ80T11 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1gQ80T11 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1gQ80T11 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1gQ80T11 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1gQ80T11 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ush1gQ80T11 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1gQ80T11 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ush1gQ80T11 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ush1gQ80T11 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Ush1gQ80T11 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ush1gQ80T11 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ush1gQ80T11 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ush1gQ80T11 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.25■□□□□ 0.03
Ush1gQ80T11 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.25■□□□□ 0.03
Ush1gQ80T11 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ush1gQ80T11 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ush1gQ80T11 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ush1gQ80T11 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ush1gQ80T11 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ush1gQ80T11 Mir1982-201ENSMUST00000157368 74 ntBASIC15.25■□□□□ 0.03
Ush1gQ80T11 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ush1gQ80T11 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ush1gQ80T11 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ush1gQ80T11 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ush1gQ80T11 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ush1gQ80T11 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ush1gQ80T11 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ush1gQ80T11 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ush1gQ80T11 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.25■□□□□ 0.03
Ush1gQ80T11 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ush1gQ80T11 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ush1gQ80T11 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ush1gQ80T11 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ush1gQ80T11 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ush1gQ80T11 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ush1gQ80T11 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.24■□□□□ 0.03
Ush1gQ80T11 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.24■□□□□ 0.03
Ush1gQ80T11 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ush1gQ80T11 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Gm17795-201ENSMUST00000214505 757 ntBASIC15.24■□□□□ 0.03
Ush1gQ80T11 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms