Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Gm16476-201ENSMUST00000221544 139 ntBASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Gm37424-201ENSMUST00000191727 561 ntBASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Gm5356-201ENSMUST00000093326 615 ntBASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Olfr582-201ENSMUST00000098212 960 ntBASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf38bQ80SY5 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Gm45784-201ENSMUST00000188360 142 ntBASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38bQ80SY5 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms