Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.92□□□□□ -0.34
Pif1Q80SX8 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.92□□□□□ -0.34
Pif1Q80SX8 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pif1Q80SX8 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pif1Q80SX8 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pif1Q80SX8 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Gm18307-201ENSMUST00000206864 949 ntBASIC12.91□□□□□ -0.34
Pif1Q80SX8 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pif1Q80SX8 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.91□□□□□ -0.34
Pif1Q80SX8 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pif1Q80SX8 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.91□□□□□ -0.34
Pif1Q80SX8 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pif1Q80SX8 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.91□□□□□ -0.34
Pif1Q80SX8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pif1Q80SX8 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pif1Q80SX8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pif1Q80SX8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pif1Q80SX8 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pif1Q80SX8 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pif1Q80SX8 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pif1Q80SX8 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pif1Q80SX8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pif1Q80SX8 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Pif1Q80SX8 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.9□□□□□ -0.34
Pif1Q80SX8 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pif1Q80SX8 Gm4984-201ENSMUST00000115987 360 ntBASIC12.9□□□□□ -0.34
Pif1Q80SX8 Gm15678-201ENSMUST00000117573 960 ntBASIC12.9□□□□□ -0.34
Pif1Q80SX8 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pif1Q80SX8 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pif1Q80SX8 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pif1Q80SX8 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pif1Q80SX8 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pif1Q80SX8 Mir7654-201ENSMUST00000185082 70 ntBASIC12.9□□□□□ -0.34
Pif1Q80SX8 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Pif1Q80SX8 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Pif1Q80SX8 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.9□□□□□ -0.34
Pif1Q80SX8 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pif1Q80SX8 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pif1Q80SX8 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pif1Q80SX8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pif1Q80SX8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pif1Q80SX8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pif1Q80SX8 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pif1Q80SX8 AC122881.1-201ENSMUST00000225757 2695 ntBASIC12.9□□□□□ -0.34
Pif1Q80SX8 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pif1Q80SX8 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pif1Q80SX8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Pif1Q80SX8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Pif1Q80SX8 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pif1Q80SX8 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pif1Q80SX8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pif1Q80SX8 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.89□□□□□ -0.35
Pif1Q80SX8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pif1Q80SX8 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Pif1Q80SX8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pif1Q80SX8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pif1Q80SX8 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.89□□□□□ -0.35
Pif1Q80SX8 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pif1Q80SX8 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pif1Q80SX8 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pif1Q80SX8 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.89□□□□□ -0.35
Pif1Q80SX8 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms