Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Rpph1-201ENSMUST00000175096 319 ntBASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scaf4Q6PFF0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Scaf4Q6PFF0 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scaf4Q6PFF0 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scaf4Q6PFF0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Scaf4Q6PFF0 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scaf4Q6PFF0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Scaf4Q6PFF0 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scaf4Q6PFF0 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Scaf4Q6PFF0 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scaf4Q6PFF0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf4Q6PFF0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf4Q6PFF0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.77□□□□□ -0.21
Scaf4Q6PFF0 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Scaf4Q6PFF0 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf4Q6PFF0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf4Q6PFF0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf4Q6PFF0 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf4Q6PFF0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf4Q6PFF0 Gm28659-201ENSMUST00000188013 759 ntBASIC13.77□□□□□ -0.21
Scaf4Q6PFF0 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf4Q6PFF0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.77□□□□□ -0.21
Scaf4Q6PFF0 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf4Q6PFF0 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.77□□□□□ -0.21
Scaf4Q6PFF0 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf4Q6PFF0 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf4Q6PFF0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf4Q6PFF0 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf4Q6PFF0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf4Q6PFF0 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf4Q6PFF0 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Gm6973-201ENSMUST00000117080 721 ntBASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms