Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Gm27243-201ENSMUST00000183964 521 ntBASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Gm43822-201ENSMUST00000200285 476 ntBASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Gm5161-201ENSMUST00000075243 853 ntBASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Mir698-201ENSMUST00000102164 109 ntBASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Gm8213-201ENSMUST00000118191 441 ntBASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Gm10156-201ENSMUST00000122364 462 ntBASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Gm3961-201ENSMUST00000204425 994 ntBASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snrnp40Q6PE01 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms