Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn9aQ62205 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn9aQ62205 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.13■□□□□ 0.17
Scn9aQ62205 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn9aQ62205 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Scn9aQ62205 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn9aQ62205 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn9aQ62205 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn9aQ62205 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Scn9aQ62205 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Scn9aQ62205 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scn9aQ62205 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn9aQ62205 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn9aQ62205 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn9aQ62205 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn9aQ62205 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn9aQ62205 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn9aQ62205 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Scn9aQ62205 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC16.12■□□□□ 0.17
Scn9aQ62205 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn9aQ62205 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn9aQ62205 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Scn9aQ62205 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Scn9aQ62205 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn9aQ62205 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn9aQ62205 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn9aQ62205 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn9aQ62205 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn9aQ62205 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.12■□□□□ 0.17
Scn9aQ62205 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn9aQ62205 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn9aQ62205 Gm11222-201ENSMUST00000119005 738 ntBASIC16.11■□□□□ 0.17
Scn9aQ62205 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC16.11■□□□□ 0.17
Scn9aQ62205 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC16.11■□□□□ 0.17
Scn9aQ62205 Gm37489-201ENSMUST00000191883 159 ntBASIC16.11■□□□□ 0.17
Scn9aQ62205 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn9aQ62205 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn9aQ62205 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Scn9aQ62205 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn9aQ62205 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Scn9aQ62205 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn9aQ62205 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn9aQ62205 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC16.11■□□□□ 0.17
Scn9aQ62205 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn9aQ62205 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn9aQ62205 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn9aQ62205 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn9aQ62205 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn9aQ62205 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn9aQ62205 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn9aQ62205 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
Scn9aQ62205 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn9aQ62205 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.1■□□□□ 0.17
Scn9aQ62205 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn9aQ62205 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn9aQ62205 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Scn9aQ62205 Gm16479-201ENSMUST00000121706 932 ntBASIC16.1■□□□□ 0.17
Scn9aQ62205 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC16.1■□□□□ 0.17
Scn9aQ62205 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Scn9aQ62205 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC16.1■□□□□ 0.17
Scn9aQ62205 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn9aQ62205 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC16.1■□□□□ 0.17
Scn9aQ62205 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn9aQ62205 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Scn9aQ62205 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.1■□□□□ 0.17
Scn9aQ62205 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn9aQ62205 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn9aQ62205 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.1■□□□□ 0.17
Scn9aQ62205 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Scn9aQ62205 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scn9aQ62205 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scn9aQ62205 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scn9aQ62205 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn9aQ62205 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn9aQ62205 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Scn9aQ62205 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 Gm11439-201ENSMUST00000118598 409 ntBASIC16.09■□□□□ 0.17
Scn9aQ62205 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.09■□□□□ 0.17
Scn9aQ62205 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 Gm24990-201ENSMUST00000157406 323 ntBASIC16.09■□□□□ 0.17
Scn9aQ62205 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Scn9aQ62205 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Scn9aQ62205 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Scn9aQ62205 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Scn9aQ62205 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms