Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim27Q62158 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trim27Q62158 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trim27Q62158 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim27Q62158 Gm12585-201ENSMUST00000117307 290 ntBASIC17.13■□□□□ 0.33
Trim27Q62158 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim27Q62158 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim27Q62158 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim27Q62158 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim27Q62158 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim27Q62158 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim27Q62158 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim27Q62158 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim27Q62158 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim27Q62158 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim27Q62158 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trim27Q62158 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trim27Q62158 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim27Q62158 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trim27Q62158 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim27Q62158 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim27Q62158 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim27Q62158 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim27Q62158 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim27Q62158 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim27Q62158 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim27Q62158 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Trim27Q62158 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC17.13■□□□□ 0.33
Trim27Q62158 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim27Q62158 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trim27Q62158 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim27Q62158 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trim27Q62158 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim27Q62158 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim27Q62158 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim27Q62158 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim27Q62158 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim27Q62158 Mir698-201ENSMUST00000102164 109 ntBASIC17.12■□□□□ 0.33
Trim27Q62158 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim27Q62158 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC17.12■□□□□ 0.33
Trim27Q62158 Gm11557-201ENSMUST00000120200 1008 ntBASIC17.12■□□□□ 0.33
Trim27Q62158 Gm13385-201ENSMUST00000121089 220 ntBASIC17.12■□□□□ 0.33
Trim27Q62158 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim27Q62158 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim27Q62158 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Trim27Q62158 Gm8927-201ENSMUST00000181978 981 ntBASIC17.12■□□□□ 0.33
Trim27Q62158 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim27Q62158 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.12■□□□□ 0.33
Trim27Q62158 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.12■□□□□ 0.33
Trim27Q62158 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim27Q62158 Gm3222-201ENSMUST00000071282 990 ntBASIC17.12■□□□□ 0.33
Trim27Q62158 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.12■□□□□ 0.33
Trim27Q62158 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim27Q62158 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim27Q62158 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.12■□□□□ 0.33
Trim27Q62158 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.12■□□□□ 0.33
Trim27Q62158 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim27Q62158 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim27Q62158 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim27Q62158 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim27Q62158 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim27Q62158 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim27Q62158 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.12■□□□□ 0.33
Trim27Q62158 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim27Q62158 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim27Q62158 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim27Q62158 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim27Q62158 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trim27Q62158 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim27Q62158 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim27Q62158 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim27Q62158 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim27Q62158 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC17.11■□□□□ 0.33
Trim27Q62158 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim27Q62158 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Trim27Q62158 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim27Q62158 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim27Q62158 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.11■□□□□ 0.33
Trim27Q62158 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC17.11■□□□□ 0.33
Trim27Q62158 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Trim27Q62158 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trim27Q62158 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim27Q62158 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim27Q62158 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.11■□□□□ 0.33
Trim27Q62158 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim27Q62158 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim27Q62158 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim27Q62158 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim27Q62158 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim27Q62158 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim27Q62158 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim27Q62158 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim27Q62158 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim27Q62158 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim27Q62158 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim27Q62158 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim27Q62158 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Trim27Q62158 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim27Q62158 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim27Q62158 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms