Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ctr9Q62018 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ctr9Q62018 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ctr9Q62018 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ctr9Q62018 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ctr9Q62018 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ctr9Q62018 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.46■□□□□ 0.23
Ctr9Q62018 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ctr9Q62018 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ctr9Q62018 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.46■□□□□ 0.23
Ctr9Q62018 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.46■□□□□ 0.23
Ctr9Q62018 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ctr9Q62018 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ctr9Q62018 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ctr9Q62018 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.46■□□□□ 0.23
Ctr9Q62018 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ctr9Q62018 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ctr9Q62018 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ctr9Q62018 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ctr9Q62018 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ctr9Q62018 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Ctr9Q62018 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Ctr9Q62018 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ctr9Q62018 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ctr9Q62018 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ctr9Q62018 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Ctr9Q62018 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ctr9Q62018 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ctr9Q62018 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ctr9Q62018 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ctr9Q62018 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ctr9Q62018 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ctr9Q62018 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ctr9Q62018 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ctr9Q62018 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Ctr9Q62018 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ctr9Q62018 Gm17795-201ENSMUST00000214505 757 ntBASIC16.45■□□□□ 0.22
Ctr9Q62018 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ctr9Q62018 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ctr9Q62018 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ctr9Q62018 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ctr9Q62018 Mir497b-201ENSMUST00000093601 125 ntBASIC16.45■□□□□ 0.22
Ctr9Q62018 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Ctr9Q62018 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.45■□□□□ 0.22
Ctr9Q62018 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ctr9Q62018 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.45■□□□□ 0.22
Ctr9Q62018 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ctr9Q62018 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ctr9Q62018 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ctr9Q62018 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ctr9Q62018 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ctr9Q62018 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ctr9Q62018 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ctr9Q62018 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ctr9Q62018 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ctr9Q62018 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ctr9Q62018 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ctr9Q62018 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ctr9Q62018 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ctr9Q62018 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ctr9Q62018 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ctr9Q62018 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.44■□□□□ 0.22
Ctr9Q62018 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ctr9Q62018 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ctr9Q62018 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ctr9Q62018 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ctr9Q62018 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ctr9Q62018 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ctr9Q62018 Gm6912-201ENSMUST00000117218 544 ntBASIC16.44■□□□□ 0.22
Ctr9Q62018 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.44■□□□□ 0.22
Ctr9Q62018 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.44■□□□□ 0.22
Ctr9Q62018 Gm37917-201ENSMUST00000194711 392 ntBASIC16.44■□□□□ 0.22
Ctr9Q62018 Gm45668-201ENSMUST00000211271 493 ntBASIC16.44■□□□□ 0.22
Ctr9Q62018 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.44■□□□□ 0.22
Ctr9Q62018 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ctr9Q62018 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ctr9Q62018 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ctr9Q62018 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ctr9Q62018 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ctr9Q62018 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ctr9Q62018 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ctr9Q62018 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ctr9Q62018 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Ctr9Q62018 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ctr9Q62018 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ctr9Q62018 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ctr9Q62018 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ctr9Q62018 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ctr9Q62018 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.43■□□□□ 0.22
Ctr9Q62018 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ctr9Q62018 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ctr9Q62018 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ctr9Q62018 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Ctr9Q62018 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Ctr9Q62018 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.43■□□□□ 0.22
Ctr9Q62018 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.43■□□□□ 0.22
Ctr9Q62018 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.43■□□□□ 0.22
Ctr9Q62018 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.43■□□□□ 0.22
Ctr9Q62018 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.43■□□□□ 0.22
Ctr9Q62018 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms