Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Notch3Q61982 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Notch3Q61982 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Notch3Q61982 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Notch3Q61982 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Notch3Q61982 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Notch3Q61982 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Notch3Q61982 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Notch3Q61982 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Notch3Q61982 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Notch3Q61982 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Notch3Q61982 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC10.77□□□□□ -0.69
Notch3Q61982 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Notch3Q61982 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Notch3Q61982 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Notch3Q61982 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Notch3Q61982 BC001981-202ENSMUST00000191393 1545 ntBASIC10.77□□□□□ -0.69
Notch3Q61982 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Notch3Q61982 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Notch3Q61982 Gm11425-201ENSMUST00000119608 498 ntBASIC10.76□□□□□ -0.69
Notch3Q61982 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Notch3Q61982 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC10.76□□□□□ -0.69
Notch3Q61982 Gm9229-201ENSMUST00000222777 126 ntBASIC10.76□□□□□ -0.69
Notch3Q61982 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Notch3Q61982 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Notch3Q61982 Gm9396-201ENSMUST00000076703 567 ntBASIC10.76□□□□□ -0.69
Notch3Q61982 Mir125a-201ENSMUST00000083545 68 ntBASIC10.76□□□□□ -0.69
Notch3Q61982 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Notch3Q61982 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Notch3Q61982 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Notch3Q61982 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Notch3Q61982 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Notch3Q61982 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC10.76□□□□□ -0.69
Notch3Q61982 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Notch3Q61982 Gm5763-201ENSMUST00000155951 1530 ntBASIC10.76□□□□□ -0.69
Notch3Q61982 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Notch3Q61982 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Notch3Q61982 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Notch3Q61982 Gm45453-201ENSMUST00000211758 853 ntBASIC10.76□□□□□ -0.69
Notch3Q61982 Gm5035-201ENSMUST00000215581 927 ntBASIC10.76□□□□□ -0.69
Notch3Q61982 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Notch3Q61982 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Notch3Q61982 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Notch3Q61982 Mmp14-206ENSMUST00000225641 3238 ntBASIC10.76□□□□□ -0.69
Notch3Q61982 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Notch3Q61982 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Notch3Q61982 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Notch3Q61982 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Notch3Q61982 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Notch3Q61982 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Notch3Q61982 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Notch3Q61982 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Notch3Q61982 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Notch3Q61982 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Notch3Q61982 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Notch3Q61982 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.75□□□□□ -0.69
Notch3Q61982 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Gm9002-201ENSMUST00000178437 499 ntBASIC10.75□□□□□ -0.69
Notch3Q61982 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Notch3Q61982 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Notch3Q61982 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Carlr-201ENSMUST00000181515 2574 ntBASIC10.75□□□□□ -0.69
Notch3Q61982 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Gm11839-201ENSMUST00000120647 1953 ntBASIC10.75□□□□□ -0.69
Notch3Q61982 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Notch3Q61982 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC10.75□□□□□ -0.69
Notch3Q61982 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC10.75□□□□□ -0.69
Notch3Q61982 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Notch3Q61982 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Notch3Q61982 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.75□□□□□ -0.69
Notch3Q61982 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms