Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ecm1Q61508 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ecm1Q61508 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.36■□□□□ 0.05
Ecm1Q61508 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ecm1Q61508 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.36■□□□□ 0.05
Ecm1Q61508 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Ecm1Q61508 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ecm1Q61508 Gm4271-201ENSMUST00000174444 973 ntBASIC15.36■□□□□ 0.05
Ecm1Q61508 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.36■□□□□ 0.05
Ecm1Q61508 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ecm1Q61508 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.36■□□□□ 0.05
Ecm1Q61508 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.36■□□□□ 0.05
Ecm1Q61508 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ecm1Q61508 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ecm1Q61508 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Ecm1Q61508 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ecm1Q61508 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.36■□□□□ 0.05
Ecm1Q61508 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ecm1Q61508 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ecm1Q61508 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ecm1Q61508 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ecm1Q61508 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.36■□□□□ 0.05
Ecm1Q61508 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ecm1Q61508 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.36■□□□□ 0.05
Ecm1Q61508 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ecm1Q61508 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ecm1Q61508 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.36■□□□□ 0.05
Ecm1Q61508 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Ecm1Q61508 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ecm1Q61508 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ecm1Q61508 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ecm1Q61508 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ecm1Q61508 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ecm1Q61508 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ecm1Q61508 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ecm1Q61508 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ecm1Q61508 Gm15770-201ENSMUST00000117498 584 ntBASIC15.35■□□□□ 0.05
Ecm1Q61508 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.35■□□□□ 0.05
Ecm1Q61508 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.35■□□□□ 0.05
Ecm1Q61508 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.35■□□□□ 0.05
Ecm1Q61508 Gm27682-201ENSMUST00000183930 110 ntBASIC15.35■□□□□ 0.05
Ecm1Q61508 Gm38144-201ENSMUST00000192790 465 ntBASIC15.35■□□□□ 0.05
Ecm1Q61508 Gm9257-201ENSMUST00000221254 232 ntBASIC15.35■□□□□ 0.05
Ecm1Q61508 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ecm1Q61508 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ecm1Q61508 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Ecm1Q61508 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.35■□□□□ 0.05
Ecm1Q61508 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.35■□□□□ 0.05
Ecm1Q61508 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ecm1Q61508 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ecm1Q61508 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ecm1Q61508 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.35■□□□□ 0.05
Ecm1Q61508 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ecm1Q61508 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ecm1Q61508 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ecm1Q61508 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ecm1Q61508 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.34■□□□□ 0.05
Ecm1Q61508 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ecm1Q61508 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ecm1Q61508 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ecm1Q61508 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ecm1Q61508 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ecm1Q61508 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ecm1Q61508 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ecm1Q61508 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.34■□□□□ 0.05
Ecm1Q61508 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ecm1Q61508 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ecm1Q61508 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC15.34■□□□□ 0.05
Ecm1Q61508 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ecm1Q61508 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC15.34■□□□□ 0.05
Ecm1Q61508 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.34■□□□□ 0.05
Ecm1Q61508 Gm19184-201ENSMUST00000196798 928 ntBASIC15.34■□□□□ 0.05
Ecm1Q61508 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.34■□□□□ 0.05
Ecm1Q61508 Gm45880-201ENSMUST00000213041 853 ntBASIC15.34■□□□□ 0.05
Ecm1Q61508 Gm19309-201ENSMUST00000218295 205 ntBASIC15.34■□□□□ 0.05
Ecm1Q61508 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ecm1Q61508 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ecm1Q61508 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ecm1Q61508 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ecm1Q61508 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.34■□□□□ 0.05
Ecm1Q61508 Gm26315-201ENSMUST00000083890 321 ntBASIC15.34■□□□□ 0.05
Ecm1Q61508 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ecm1Q61508 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Ecm1Q61508 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.34■□□□□ 0.05
Ecm1Q61508 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.34■□□□□ 0.05
Ecm1Q61508 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ecm1Q61508 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ecm1Q61508 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ecm1Q61508 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ecm1Q61508 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ecm1Q61508 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ecm1Q61508 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ecm1Q61508 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ecm1Q61508 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ecm1Q61508 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.34■□□□□ 0.05
Ecm1Q61508 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ecm1Q61508 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ecm1Q61508 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.33■□□□□ 0.05
Ecm1Q61508 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.33■□□□□ 0.05
Ecm1Q61508 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.33■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms