Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sox17Q61473 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox17Q61473 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.1□□□□□ -0.31
Sox17Q61473 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox17Q61473 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox17Q61473 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox17Q61473 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox17Q61473 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox17Q61473 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox17Q61473 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox17Q61473 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox17Q61473 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox17Q61473 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sox17Q61473 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox17Q61473 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sox17Q61473 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.1□□□□□ -0.31
Sox17Q61473 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.1□□□□□ -0.31
Sox17Q61473 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.1□□□□□ -0.31
Sox17Q61473 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox17Q61473 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Sox17Q61473 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox17Q61473 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sox17Q61473 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.1□□□□□ -0.31
Sox17Q61473 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox17Q61473 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox17Q61473 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox17Q61473 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox17Q61473 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox17Q61473 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox17Q61473 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox17Q61473 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox17Q61473 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox17Q61473 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Sox17Q61473 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Sox17Q61473 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox17Q61473 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox17Q61473 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox17Q61473 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Sox17Q61473 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox17Q61473 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox17Q61473 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox17Q61473 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox17Q61473 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.09□□□□□ -0.31
Sox17Q61473 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox17Q61473 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.09□□□□□ -0.31
Sox17Q61473 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox17Q61473 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.09□□□□□ -0.31
Sox17Q61473 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Sox17Q61473 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.09□□□□□ -0.31
Sox17Q61473 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox17Q61473 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.09□□□□□ -0.31
Sox17Q61473 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.09□□□□□ -0.31
Sox17Q61473 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox17Q61473 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox17Q61473 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox17Q61473 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox17Q61473 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox17Q61473 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.09□□□□□ -0.31
Sox17Q61473 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox17Q61473 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox17Q61473 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox17Q61473 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox17Q61473 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox17Q61473 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox17Q61473 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox17Q61473 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox17Q61473 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox17Q61473 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sox17Q61473 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sox17Q61473 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sox17Q61473 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sox17Q61473 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sox17Q61473 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox17Q61473 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox17Q61473 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox17Q61473 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox17Q61473 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox17Q61473 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox17Q61473 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.08□□□□□ -0.32
Sox17Q61473 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Sox17Q61473 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox17Q61473 Gm9385-201ENSMUST00000117563 472 ntBASIC13.08□□□□□ -0.32
Sox17Q61473 Gm11452-201ENSMUST00000122376 690 ntBASIC13.08□□□□□ -0.32
Sox17Q61473 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.08□□□□□ -0.32
Sox17Q61473 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.08□□□□□ -0.32
Sox17Q61473 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.08□□□□□ -0.32
Sox17Q61473 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sox17Q61473 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox17Q61473 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox17Q61473 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox17Q61473 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox17Q61473 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.08□□□□□ -0.32
Sox17Q61473 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sox17Q61473 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox17Q61473 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox17Q61473 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Sox17Q61473 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox17Q61473 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox17Q61473 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.08□□□□□ -0.32
Sox17Q61473 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms