Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm11543-201ENSMUST00000120758 370 ntBASIC13.31□□□□□ -0.28
Nr1h4Q60641 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.31□□□□□ -0.28
Nr1h4Q60641 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
Nr1h4Q60641 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.31□□□□□ -0.28
Nr1h4Q60641 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.31□□□□□ -0.28
Nr1h4Q60641 Gm44608-201ENSMUST00000206827 855 ntBASIC13.31□□□□□ -0.28
Nr1h4Q60641 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Nr1h4Q60641 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.31□□□□□ -0.28
Nr1h4Q60641 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nr1h4Q60641 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nr1h4Q60641 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nr1h4Q60641 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nr1h4Q60641 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Nr1h4Q60641 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nr1h4Q60641 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.31□□□□□ -0.28
Nr1h4Q60641 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nr1h4Q60641 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nr1h4Q60641 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Nr1h4Q60641 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nr1h4Q60641 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nr1h4Q60641 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nr1h4Q60641 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.31□□□□□ -0.28
Nr1h4Q60641 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nr1h4Q60641 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nr1h4Q60641 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.3□□□□□ -0.28
Nr1h4Q60641 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Matn2-206ENSMUST00000228570 2798 ntBASIC13.3□□□□□ -0.28
Nr1h4Q60641 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.3□□□□□ -0.28
Nr1h4Q60641 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.3□□□□□ -0.28
Nr1h4Q60641 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.3□□□□□ -0.28
Nr1h4Q60641 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.3□□□□□ -0.28
Nr1h4Q60641 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nr1h4Q60641 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.29□□□□□ -0.28
Nr1h4Q60641 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.29□□□□□ -0.28
Nr1h4Q60641 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.29□□□□□ -0.28
Nr1h4Q60641 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Gm14140-201ENSMUST00000119999 995 ntBASIC13.29□□□□□ -0.28
Nr1h4Q60641 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Gm2651-201ENSMUST00000203560 838 ntBASIC13.29□□□□□ -0.28
Nr1h4Q60641 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nr1h4Q60641 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.28□□□□□ -0.28
Nr1h4Q60641 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms