Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Gm6736-201ENSMUST00000166583 948 ntBASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Gm5779-201ENSMUST00000218467 910 ntBASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Matn2-206ENSMUST00000228570 2798 ntBASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5d-4Q5R1F6 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Trav5d-4Q5R1F6 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav5d-4Q5R1F6 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav5d-4Q5R1F6 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav5d-4Q5R1F6 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav5d-4Q5R1F6 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.02□□□□□ -0.48
Trav5d-4Q5R1F6 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.02□□□□□ -0.48
Trav5d-4Q5R1F6 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav5d-4Q5R1F6 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav5d-4Q5R1F6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav5d-4Q5R1F6 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Gm9719-201ENSMUST00000162765 543 ntBASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 AA543401-201ENSMUST00000164248 1269 ntBASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Gm44608-201ENSMUST00000206827 855 ntBASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Mir125a-201ENSMUST00000083545 68 ntBASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5d-4Q5R1F6 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms