Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Gm27533-201ENSMUST00000183800 152 ntBASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC16.64■□□□□ 0.26
Rnf20Q5DTM8 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rnf20Q5DTM8 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Gm33320-201ENSMUST00000192232 530 ntBASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Shd-206ENSMUST00000225145 998 ntBASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf20Q5DTM8 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf20Q5DTM8 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf20Q5DTM8 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf20Q5DTM8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf20Q5DTM8 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf20Q5DTM8 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf20Q5DTM8 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf20Q5DTM8 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf20Q5DTM8 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Rnf20Q5DTM8 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rnf20Q5DTM8 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.63■□□□□ 0.25
Rnf20Q5DTM8 Gm2445-201ENSMUST00000182798 989 ntBASIC16.63■□□□□ 0.25
Rnf20Q5DTM8 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf20Q5DTM8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Rnf20Q5DTM8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf20Q5DTM8 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf20Q5DTM8 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf20Q5DTM8 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf20Q5DTM8 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.63■□□□□ 0.25
Rnf20Q5DTM8 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rnf20Q5DTM8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rnf20Q5DTM8 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf20Q5DTM8 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rnf20Q5DTM8 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf20Q5DTM8 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 Gm22175-201ENSMUST00000175007 78 ntBASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 Gm29741-201ENSMUST00000192667 421 ntBASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms