Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.27■□□□□ 0.2
Prpf38aQ4FK66 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38aQ4FK66 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.27■□□□□ 0.2
Prpf38aQ4FK66 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38aQ4FK66 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38aQ4FK66 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38aQ4FK66 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Prpf38aQ4FK66 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38aQ4FK66 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38aQ4FK66 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38aQ4FK66 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Prpf38aQ4FK66 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Prpf38aQ4FK66 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.27■□□□□ 0.2
Prpf38aQ4FK66 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38aQ4FK66 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38aQ4FK66 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.27■□□□□ 0.2
Prpf38aQ4FK66 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Prpf38aQ4FK66 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38aQ4FK66 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38aQ4FK66 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38aQ4FK66 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38aQ4FK66 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38aQ4FK66 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prpf38aQ4FK66 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.27■□□□□ 0.19
Prpf38aQ4FK66 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prpf38aQ4FK66 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prpf38aQ4FK66 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Prpf38aQ4FK66 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prpf38aQ4FK66 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prpf38aQ4FK66 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Prpf38aQ4FK66 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prpf38aQ4FK66 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Gm15376-201ENSMUST00000122258 783 ntBASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Gm26464-201ENSMUST00000157094 305 ntBASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Gm43433-201ENSMUST00000196573 481 ntBASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38aQ4FK66 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf38aQ4FK66 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf38aQ4FK66 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf38aQ4FK66 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.25■□□□□ 0.19
Prpf38aQ4FK66 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf38aQ4FK66 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms