Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Mmp25Q3U435 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.13□□□□□ -0.31
Mmp25Q3U435 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp25Q3U435 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp25Q3U435 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.13□□□□□ -0.31
Mmp25Q3U435 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp25Q3U435 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.13□□□□□ -0.31
Mmp25Q3U435 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Gm5866-201ENSMUST00000177881 973 ntBASIC13.13□□□□□ -0.31
Mmp25Q3U435 Gm8927-201ENSMUST00000181978 981 ntBASIC13.13□□□□□ -0.31
Mmp25Q3U435 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Mmp25Q3U435 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.13□□□□□ -0.31
Mmp25Q3U435 Gm44855-201ENSMUST00000205725 362 ntBASIC13.13□□□□□ -0.31
Mmp25Q3U435 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp25Q3U435 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Gm3222-201ENSMUST00000071282 990 ntBASIC13.13□□□□□ -0.31
Mmp25Q3U435 Mir497b-201ENSMUST00000093601 125 ntBASIC13.13□□□□□ -0.31
Mmp25Q3U435 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.13□□□□□ -0.31
Mmp25Q3U435 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp25Q3U435 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp25Q3U435 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Syt7-205ENSMUST00000224135 1557 ntBASIC13.12□□□□□ -0.31
Mmp25Q3U435 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp25Q3U435 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp25Q3U435 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.12□□□□□ -0.31
Mmp25Q3U435 Mir698-201ENSMUST00000102164 109 ntBASIC13.12□□□□□ -0.31
Mmp25Q3U435 Gm22189-201ENSMUST00000103822 86 ntBASIC13.12□□□□□ -0.31
Mmp25Q3U435 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.12□□□□□ -0.31
Mmp25Q3U435 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Gm24420-201ENSMUST00000176676 59 ntBASIC13.12□□□□□ -0.31
Mmp25Q3U435 Gm2445-201ENSMUST00000182798 989 ntBASIC13.12□□□□□ -0.31
Mmp25Q3U435 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.12□□□□□ -0.31
Mmp25Q3U435 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.12□□□□□ -0.31
Mmp25Q3U435 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp25Q3U435 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp25Q3U435 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.12□□□□□ -0.31
Mmp25Q3U435 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp25Q3U435 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp25Q3U435 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp25Q3U435 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp25Q3U435 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp25Q3U435 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp25Q3U435 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp25Q3U435 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp25Q3U435 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Mmp25Q3U435 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms