Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.11□□□□□ -0.47
Q3U1D9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.11□□□□□ -0.47
Q3U1D9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.11□□□□□ -0.47
Q3U1D9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Q3U1D9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.11□□□□□ -0.47
Q3U1D9 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.11□□□□□ -0.47
Q3U1D9 Gm12138-201ENSMUST00000122180 951 ntBASIC12.11□□□□□ -0.47
Q3U1D9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.11□□□□□ -0.47
Q3U1D9 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.11□□□□□ -0.47
Q3U1D9 Gm8927-201ENSMUST00000181978 981 ntBASIC12.11□□□□□ -0.47
Q3U1D9 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Gm27701-201ENSMUST00000184498 110 ntBASIC12.11□□□□□ -0.47
Q3U1D9 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.11□□□□□ -0.47
Q3U1D9 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.11□□□□□ -0.47
Q3U1D9 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.11□□□□□ -0.47
Q3U1D9 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Q3U1D9 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Q3U1D9 Gm3222-201ENSMUST00000071282 990 ntBASIC12.11□□□□□ -0.47
Q3U1D9 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Q3U1D9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.11□□□□□ -0.47
Q3U1D9 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.11□□□□□ -0.47
Q3U1D9 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Q3U1D9 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.11□□□□□ -0.47
Q3U1D9 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Q3U1D9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.1□□□□□ -0.47
Q3U1D9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.1□□□□□ -0.47
Q3U1D9 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
Q3U1D9 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Q3U1D9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.1□□□□□ -0.47
Q3U1D9 Gm9002-201ENSMUST00000178437 499 ntBASIC12.1□□□□□ -0.47
Q3U1D9 Mir7654-201ENSMUST00000185082 70 ntBASIC12.1□□□□□ -0.47
Q3U1D9 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.1□□□□□ -0.47
Q3U1D9 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.1□□□□□ -0.47
Q3U1D9 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Q3U1D9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.1□□□□□ -0.47
Q3U1D9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Q3U1D9 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Q3U1D9 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Q3U1D9 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Q3U1D9 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3U1D9 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.1□□□□□ -0.47
Q3U1D9 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Q3U1D9 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms