Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Q3KNL4 Gm2810-201ENSMUST00000118681 990 ntBASIC13.72□□□□□ -0.21
Q3KNL4 Gm14494-201ENSMUST00000118786 435 ntBASIC13.72□□□□□ -0.21
Q3KNL4 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.72□□□□□ -0.21
Q3KNL4 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.72□□□□□ -0.21
Q3KNL4 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Q3KNL4 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Q3KNL4 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Q3KNL4 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Q3KNL4 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Q3KNL4 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Q3KNL4 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Q3KNL4 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Q3KNL4 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Q3KNL4 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Q3KNL4 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Q3KNL4 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Q3KNL4 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Q3KNL4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Q3KNL4 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Q3KNL4 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Q3KNL4 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Q3KNL4 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Q3KNL4 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Q3KNL4 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Q3KNL4 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Q3KNL4 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Q3KNL4 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Q3KNL4 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Q3KNL4 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Q3KNL4 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.71□□□□□ -0.21
Q3KNL4 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Q3KNL4 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.71□□□□□ -0.21
Q3KNL4 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.71□□□□□ -0.21
Q3KNL4 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Q3KNL4 Rprl2-201ENSMUST00000157150 290 ntBASIC13.71□□□□□ -0.21
Q3KNL4 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Q3KNL4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Q3KNL4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Q3KNL4 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Q3KNL4 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Q3KNL4 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Q3KNL4 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Q3KNL4 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Q3KNL4 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Q3KNL4 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Q3KNL4 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.71□□□□□ -0.22
Q3KNL4 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.71□□□□□ -0.22
Q3KNL4 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.7□□□□□ -0.22
Q3KNL4 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.7□□□□□ -0.22
Q3KNL4 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.7□□□□□ -0.22
Q3KNL4 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 Gm11779-201ENSMUST00000118541 368 ntBASIC13.7□□□□□ -0.22
Q3KNL4 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.7□□□□□ -0.22
Q3KNL4 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.7□□□□□ -0.22
Q3KNL4 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Q3KNL4 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.7□□□□□ -0.22
Q3KNL4 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.7□□□□□ -0.22
Q3KNL4 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.7□□□□□ -0.22
Q3KNL4 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Q3KNL4 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.7□□□□□ -0.22
Q3KNL4 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Q3KNL4 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3KNL4 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.69□□□□□ -0.22
Q3KNL4 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Q3KNL4 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3KNL4 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Q3KNL4 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Q3KNL4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3KNL4 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.69□□□□□ -0.22
Q3KNL4 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Q3KNL4 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.69□□□□□ -0.22
Q3KNL4 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3KNL4 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
Q3KNL4 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.69□□□□□ -0.22
Q3KNL4 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms