Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Gm14585-201ENSMUST00000120713 634 ntBASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC7.2□□□□□ -1.26
Ush2AQ2QI47 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Gm15897-201ENSMUST00000117770 1486 ntBASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 AY036118-201ENSMUST00000200021 923 ntBASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Mir7686-201ENSMUST00000200604 57 ntBASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Gm1848-201ENSMUST00000120711 789 ntBASIC7.19□□□□□ -1.26
Ush2AQ2QI47 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Gm29615-201ENSMUST00000185371 697 ntBASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Gm28224-201ENSMUST00000186078 697 ntBASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Gm29001-201ENSMUST00000186177 697 ntBASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Gm28292-201ENSMUST00000186593 697 ntBASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Gm28101-201ENSMUST00000187608 697 ntBASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Gm29076-201ENSMUST00000187689 697 ntBASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Gm28302-201ENSMUST00000187931 697 ntBASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Gm28646-201ENSMUST00000188220 697 ntBASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Gm28205-201ENSMUST00000189177 697 ntBASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Gm29032-201ENSMUST00000189797 697 ntBASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Gm28695-201ENSMUST00000190300 697 ntBASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Gm37448-201ENSMUST00000192795 697 ntBASIC7.19□□□□□ -1.26
Ush2AQ2QI47 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Gm18463-201ENSMUST00000207258 474 ntBASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Gm18460-201ENSMUST00000208088 464 ntBASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Ush2AQ2QI47 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC7.19□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms