Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.2□□□□□ -0.14
Gabpb1Q00420 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.2□□□□□ -0.14
Gabpb1Q00420 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.2□□□□□ -0.14
Gabpb1Q00420 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gabpb1Q00420 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.19□□□□□ -0.14
Gabpb1Q00420 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.19□□□□□ -0.14
Gabpb1Q00420 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Gabpb1Q00420 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.19□□□□□ -0.14
Gabpb1Q00420 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gabpb1Q00420 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.18□□□□□ -0.14
Gabpb1Q00420 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gabpb1Q00420 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.18□□□□□ -0.14
Gabpb1Q00420 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gabpb1Q00420 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Gabpb1Q00420 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gabpb1Q00420 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Gabpb1Q00420 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.18□□□□□ -0.14
Gabpb1Q00420 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gabpb1Q00420 Mir1897-201ENSMUST00000122581 272 ntBASIC14.18□□□□□ -0.14
Gabpb1Q00420 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gabpb1Q00420 Gm27533-201ENSMUST00000183800 152 ntBASIC14.18□□□□□ -0.14
Gabpb1Q00420 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gabpb1Q00420 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Gabpb1Q00420 Shd-206ENSMUST00000225145 998 ntBASIC14.18□□□□□ -0.14
Gabpb1Q00420 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Gabpb1Q00420 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gabpb1Q00420 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gabpb1Q00420 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gabpb1Q00420 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gabpb1Q00420 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gabpb1Q00420 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gabpb1Q00420 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Gabpb1Q00420 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.18□□□□□ -0.14
Gabpb1Q00420 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gabpb1Q00420 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.18□□□□□ -0.14
Gabpb1Q00420 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gabpb1Q00420 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gabpb1Q00420 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gabpb1Q00420 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Gm44719-201ENSMUST00000206404 149 ntBASIC14.17□□□□□ -0.14
Gabpb1Q00420 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms