Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 AC154222.2-201ENSMUST00000225848 607 ntBASIC9.27□□□□□ -0.93
PrkdcP97313 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PrkdcP97313 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PrkdcP97313 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC9.27□□□□□ -0.93
PrkdcP97313 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PrkdcP97313 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
PrkdcP97313 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PrkdcP97313 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PrkdcP97313 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
PrkdcP97313 Ighv5-7-201ENSMUST00000192302 244 ntBASIC9.27□□□□□ -0.93
PrkdcP97313 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PrkdcP97313 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC9.27□□□□□ -0.93
PrkdcP97313 Gm38049-201ENSMUST00000195698 1372 ntBASIC9.27□□□□□ -0.93
PrkdcP97313 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC9.27□□□□□ -0.93
PrkdcP97313 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC9.27□□□□□ -0.93
PrkdcP97313 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Gm10605-202ENSMUST00000183019 3198 ntBASIC9.26□□□□□ -0.93
PrkdcP97313 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC9.26□□□□□ -0.93
PrkdcP97313 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
PrkdcP97313 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
PrkdcP97313 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC9.26□□□□□ -0.93
PrkdcP97313 Gm26185-201ENSMUST00000157692 266 ntBASIC9.26□□□□□ -0.93
PrkdcP97313 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC9.26□□□□□ -0.93
PrkdcP97313 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC9.26□□□□□ -0.93
PrkdcP97313 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC9.26□□□□□ -0.93
PrkdcP97313 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC9.26□□□□□ -0.93
PrkdcP97313 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC9.26□□□□□ -0.93
PrkdcP97313 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC9.26□□□□□ -0.93
PrkdcP97313 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
PrkdcP97313 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC9.26□□□□□ -0.93
PrkdcP97313 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Gm12539-201ENSMUST00000121549 1098 ntBASIC9.26□□□□□ -0.93
PrkdcP97313 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC9.26□□□□□ -0.93
PrkdcP97313 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC9.26□□□□□ -0.93
PrkdcP97313 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC9.26□□□□□ -0.93
PrkdcP97313 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
PrkdcP97313 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.26□□□□□ -0.93
PrkdcP97313 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PrkdcP97313 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
PrkdcP97313 Gm25545-201ENSMUST00000122673 323 ntBASIC9.25□□□□□ -0.93
PrkdcP97313 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
PrkdcP97313 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC9.25□□□□□ -0.93
PrkdcP97313 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
PrkdcP97313 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
PrkdcP97313 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PrkdcP97313 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PrkdcP97313 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
PrkdcP97313 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC9.25□□□□□ -0.93
PrkdcP97313 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PrkdcP97313 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
PrkdcP97313 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC9.25□□□□□ -0.93
PrkdcP97313 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC9.25□□□□□ -0.93
PrkdcP97313 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC9.25□□□□□ -0.93
PrkdcP97313 Gm27046-201ENSMUST00000182160 463 ntBASIC9.25□□□□□ -0.93
PrkdcP97313 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC9.25□□□□□ -0.93
PrkdcP97313 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
PrkdcP97313 AC161537.1-201ENSMUST00000226199 1015 ntBASIC9.25□□□□□ -0.93
PrkdcP97313 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
PrkdcP97313 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
PrkdcP97313 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
PrkdcP97313 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms