Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43bP86448 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43bP86448 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43bP86448 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43bP86448 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trim43bP86448 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trim43bP86448 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trim43bP86448 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.39□□□□□ -0.11
Trim43bP86448 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Gm27430-201ENSMUST00000184585 107 ntBASIC14.39□□□□□ -0.11
Trim43bP86448 Gm44333-201ENSMUST00000197168 107 ntBASIC14.39□□□□□ -0.11
Trim43bP86448 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.39□□□□□ -0.11
Trim43bP86448 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.39□□□□□ -0.11
Trim43bP86448 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim43bP86448 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim43bP86448 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43bP86448 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trim43bP86448 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.38□□□□□ -0.11
Trim43bP86448 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trim43bP86448 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.38□□□□□ -0.11
Trim43bP86448 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trim43bP86448 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim43bP86448 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 Gm2810-201ENSMUST00000118681 990 ntBASIC14.38□□□□□ -0.11
Trim43bP86448 Gm24158-201ENSMUST00000175263 71 ntBASIC14.38□□□□□ -0.11
Trim43bP86448 Gm10253-201ENSMUST00000194270 940 ntBASIC14.38□□□□□ -0.11
Trim43bP86448 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trim43bP86448 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trim43bP86448 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.38□□□□□ -0.11
Trim43bP86448 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim43bP86448 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43bP86448 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trim43bP86448 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Trim43bP86448 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Trim43bP86448 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Trim43bP86448 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.37□□□□□ -0.11
Trim43bP86448 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.37□□□□□ -0.11
Trim43bP86448 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim43bP86448 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms