Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pfn1P62962 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pfn1P62962 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pfn1P62962 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pfn1P62962 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pfn1P62962 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pfn1P62962 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pfn1P62962 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pfn1P62962 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pfn1P62962 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Pfn1P62962 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pfn1P62962 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pfn1P62962 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pfn1P62962 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pfn1P62962 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pfn1P62962 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Pfn1P62962 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pfn1P62962 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pfn1P62962 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC10.84□□□□□ -0.67
Pfn1P62962 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pfn1P62962 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Pfn1P62962 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Pfn1P62962 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Pfn1P62962 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Paupar-201ENSMUST00000194826 3482 ntBASIC10.83□□□□□ -0.68
Pfn1P62962 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.83□□□□□ -0.68
Pfn1P62962 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Gm7222-201ENSMUST00000117512 906 ntBASIC10.83□□□□□ -0.68
Pfn1P62962 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Pfn1P62962 Gm15593-201ENSMUST00000122085 1008 ntBASIC10.83□□□□□ -0.68
Pfn1P62962 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Pfn1P62962 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Pfn1P62962 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Pfn1P62962 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Pfn1P62962 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC10.83□□□□□ -0.68
Pfn1P62962 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC10.83□□□□□ -0.68
Pfn1P62962 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfn1P62962 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Pfn1P62962 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC10.83□□□□□ -0.68
Pfn1P62962 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pfn1P62962 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfn1P62962 AC130669.1-201ENSMUST00000228537 1672 ntBASIC10.82□□□□□ -0.68
Pfn1P62962 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfn1P62962 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfn1P62962 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfn1P62962 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfn1P62962 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Pfn1P62962 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Pfn1P62962 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.82□□□□□ -0.68
Pfn1P62962 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pfn1P62962 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pfn1P62962 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC10.82□□□□□ -0.68
Pfn1P62962 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pfn1P62962 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC10.82□□□□□ -0.68
Pfn1P62962 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC10.82□□□□□ -0.68
Pfn1P62962 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfn1P62962 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pfn1P62962 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC10.82□□□□□ -0.68
Pfn1P62962 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pfn1P62962 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pfn1P62962 Gm12020-201ENSMUST00000119030 2042 ntBASIC10.82□□□□□ -0.68
Pfn1P62962 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfn1P62962 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Pfn1P62962 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfn1P62962 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfn1P62962 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms