Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm14350-201ENSMUST00000116642 640 ntBASIC18.73■□□□□ 0.59
Nphp4P59240 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp4P59240 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp4P59240 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp4P59240 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp4P59240 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC18.73■□□□□ 0.59
Nphp4P59240 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC18.73■□□□□ 0.59
Nphp4P59240 Gm44064-201ENSMUST00000204964 1087 ntBASIC18.73■□□□□ 0.59
Nphp4P59240 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC18.73■□□□□ 0.59
Nphp4P59240 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp4P59240 Gm42872-201ENSMUST00000200026 1967 ntBASIC18.73■□□□□ 0.59
Nphp4P59240 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp4P59240 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Nphp4P59240 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp4P59240 Gm37736-201ENSMUST00000193564 2802 ntBASIC18.73■□□□□ 0.59
Nphp4P59240 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp4P59240 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC18.72■□□□□ 0.59
Nphp4P59240 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp4P59240 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Nphp4P59240 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp4P59240 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp4P59240 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp4P59240 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp4P59240 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Nphp4P59240 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC18.72■□□□□ 0.59
Nphp4P59240 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Nphp4P59240 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp4P59240 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC18.72■□□□□ 0.59
Nphp4P59240 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp4P59240 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp4P59240 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp4P59240 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC18.72■□□□□ 0.59
Nphp4P59240 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp4P59240 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp4P59240 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp4P59240 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp4P59240 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp4P59240 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp4P59240 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp4P59240 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Nphp4P59240 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Nphp4P59240 Gm38197-201ENSMUST00000192320 2122 ntBASIC18.71■□□□□ 0.59
Nphp4P59240 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nphp4P59240 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nphp4P59240 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nphp4P59240 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nphp4P59240 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nphp4P59240 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nphp4P59240 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Nphp4P59240 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Nphp4P59240 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC18.71■□□□□ 0.59
Nphp4P59240 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nphp4P59240 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nphp4P59240 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nphp4P59240 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nphp4P59240 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nphp4P59240 Gm27682-201ENSMUST00000183930 110 ntBASIC18.71■□□□□ 0.59
Nphp4P59240 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC18.71■□□□□ 0.59
Nphp4P59240 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Nphp4P59240 Gm18630-201ENSMUST00000222109 1397 ntBASIC18.71■□□□□ 0.59
Nphp4P59240 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Nphp4P59240 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nphp4P59240 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nphp4P59240 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Nphp4P59240 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Nphp4P59240 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Nphp4P59240 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC18.71■□□□□ 0.58
Nphp4P59240 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Nphp4P59240 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nphp4P59240 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nphp4P59240 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nphp4P59240 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nphp4P59240 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nphp4P59240 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nphp4P59240 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nphp4P59240 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Nphp4P59240 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nphp4P59240 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nphp4P59240 CT573086.1-201ENSMUST00000227202 1074 ntBASIC18.7■□□□□ 0.58
Nphp4P59240 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
Nphp4P59240 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Nphp4P59240 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Nphp4P59240 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nphp4P59240 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC18.7■□□□□ 0.58
Nphp4P59240 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nphp4P59240 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.7■□□□□ 0.58
Nphp4P59240 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nphp4P59240 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nphp4P59240 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nphp4P59240 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nphp4P59240 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nphp4P59240 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nphp4P59240 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nphp4P59240 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nphp4P59240 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nphp4P59240 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nphp4P59240 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Nphp4P59240 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nphp4P59240 Gm6007-201ENSMUST00000208170 823 ntBASIC18.69■□□□□ 0.58
Nphp4P59240 Gm40466-201ENSMUST00000212174 422 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms