Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp3P58854 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Gm23935-201ENSMUST00000102303 57 ntBASIC14.28□□□□□ -0.12
Tubgcp3P58854 Gm24270-201ENSMUST00000102326 57 ntBASIC14.28□□□□□ -0.12
Tubgcp3P58854 Mir449b-201ENSMUST00000104833 80 ntBASIC14.28□□□□□ -0.12
Tubgcp3P58854 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Gm24245-201ENSMUST00000157318 57 ntBASIC14.28□□□□□ -0.12
Tubgcp3P58854 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 AA543401-201ENSMUST00000164248 1269 ntBASIC14.28□□□□□ -0.12
Tubgcp3P58854 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp3P58854 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubgcp3P58854 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubgcp3P58854 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubgcp3P58854 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.27□□□□□ -0.12
Tubgcp3P58854 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
Tubgcp3P58854 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubgcp3P58854 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubgcp3P58854 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubgcp3P58854 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubgcp3P58854 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Tubgcp3P58854 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubgcp3P58854 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubgcp3P58854 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubgcp3P58854 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.27□□□□□ -0.13
Tubgcp3P58854 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tubgcp3P58854 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Tubgcp3P58854 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tubgcp3P58854 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tubgcp3P58854 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.27□□□□□ -0.13
Tubgcp3P58854 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.27□□□□□ -0.13
Tubgcp3P58854 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubgcp3P58854 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubgcp3P58854 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubgcp3P58854 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tubgcp3P58854 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubgcp3P58854 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tubgcp3P58854 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubgcp3P58854 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubgcp3P58854 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.27□□□□□ -0.13
Tubgcp3P58854 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubgcp3P58854 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Tubgcp3P58854 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubgcp3P58854 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tubgcp3P58854 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubgcp3P58854 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubgcp3P58854 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Tubgcp3P58854 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Tubgcp3P58854 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tubgcp3P58854 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubgcp3P58854 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.26□□□□□ -0.13
Tubgcp3P58854 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Tubgcp3P58854 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubgcp3P58854 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubgcp3P58854 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubgcp3P58854 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tubgcp3P58854 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubgcp3P58854 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubgcp3P58854 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubgcp3P58854 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Tubgcp3P58854 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubgcp3P58854 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.26□□□□□ -0.13
Tubgcp3P58854 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubgcp3P58854 Gm26308-201ENSMUST00000157768 69 ntBASIC14.26□□□□□ -0.13
Tubgcp3P58854 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubgcp3P58854 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.26□□□□□ -0.13
Tubgcp3P58854 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tubgcp3P58854 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms