Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tpm1P58771 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tpm1P58771 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.59■□□□□ 0.09
Tpm1P58771 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.59■□□□□ 0.09
Tpm1P58771 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tpm1P58771 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.59■□□□□ 0.09
Tpm1P58771 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.59■□□□□ 0.09
Tpm1P58771 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.59■□□□□ 0.09
Tpm1P58771 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tpm1P58771 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tpm1P58771 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tpm1P58771 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tpm1P58771 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tpm1P58771 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.59■□□□□ 0.09
Tpm1P58771 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tpm1P58771 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tpm1P58771 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Tpm1P58771 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tpm1P58771 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tpm1P58771 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tpm1P58771 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tpm1P58771 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.59■□□□□ 0.09
Tpm1P58771 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tpm1P58771 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Tpm1P58771 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tpm1P58771 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.58■□□□□ 0.09
Tpm1P58771 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tpm1P58771 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tpm1P58771 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.58■□□□□ 0.09
Tpm1P58771 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tpm1P58771 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
Tpm1P58771 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
Tpm1P58771 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Tpm1P58771 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Tpm1P58771 Gm9103-201ENSMUST00000119371 405 ntBASIC15.58■□□□□ 0.08
Tpm1P58771 Gm11452-201ENSMUST00000122376 690 ntBASIC15.58■□□□□ 0.08
Tpm1P58771 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Tpm1P58771 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tpm1P58771 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.58■□□□□ 0.08
Tpm1P58771 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.58■□□□□ 0.08
Tpm1P58771 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tpm1P58771 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Tpm1P58771 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Tpm1P58771 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tpm1P58771 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tpm1P58771 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tpm1P58771 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tpm1P58771 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tpm1P58771 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC15.58■□□□□ 0.08
Tpm1P58771 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC15.58■□□□□ 0.08
Tpm1P58771 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tpm1P58771 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Tpm1P58771 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tpm1P58771 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tpm1P58771 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tpm1P58771 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.57■□□□□ 0.08
Tpm1P58771 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tpm1P58771 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Tpm1P58771 Gm16198-201ENSMUST00000118766 670 ntBASIC15.57■□□□□ 0.08
Tpm1P58771 Gm5479-201ENSMUST00000160578 435 ntBASIC15.57■□□□□ 0.08
Tpm1P58771 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Tpm1P58771 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.57■□□□□ 0.08
Tpm1P58771 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tpm1P58771 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tpm1P58771 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tpm1P58771 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tpm1P58771 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tpm1P58771 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tpm1P58771 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tpm1P58771 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tpm1P58771 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.57■□□□□ 0.08
Tpm1P58771 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Tpm1P58771 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tpm1P58771 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tpm1P58771 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tpm1P58771 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tpm1P58771 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tpm1P58771 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tpm1P58771 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tpm1P58771 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Tpm1P58771 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Tpm1P58771 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tpm1P58771 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tpm1P58771 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tpm1P58771 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tpm1P58771 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.56■□□□□ 0.08
Tpm1P58771 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tpm1P58771 Mir8098-201ENSMUST00000184011 137 ntBASIC15.56■□□□□ 0.08
Tpm1P58771 Thap2-203ENSMUST00000218989 527 ntBASIC15.56■□□□□ 0.08
Tpm1P58771 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.56■□□□□ 0.08
Tpm1P58771 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tpm1P58771 Gm15590-201ENSMUST00000078419 552 ntBASIC15.56■□□□□ 0.08
Tpm1P58771 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.56■□□□□ 0.08
Tpm1P58771 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tpm1P58771 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tpm1P58771 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.56■□□□□ 0.08
Tpm1P58771 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tpm1P58771 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tpm1P58771 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.56■□□□□ 0.08
Tpm1P58771 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms