Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm6244-201ENSMUST00000178732 841 ntBASIC14.86□□□□□ -0.03
NrlP54846 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NrlP54846 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.86□□□□□ -0.03
NrlP54846 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NrlP54846 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.86□□□□□ -0.03
NrlP54846 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.86□□□□□ -0.03
NrlP54846 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NrlP54846 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
NrlP54846 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NrlP54846 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NrlP54846 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NrlP54846 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NrlP54846 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NrlP54846 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.86□□□□□ -0.03
NrlP54846 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NrlP54846 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NrlP54846 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.86□□□□□ -0.03
NrlP54846 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NrlP54846 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NrlP54846 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NrlP54846 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NrlP54846 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NrlP54846 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NrlP54846 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NrlP54846 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NrlP54846 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NrlP54846 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.85□□□□□ -0.03
NrlP54846 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NrlP54846 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NrlP54846 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NrlP54846 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.85□□□□□ -0.03
NrlP54846 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NrlP54846 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NrlP54846 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NrlP54846 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NrlP54846 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NrlP54846 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NrlP54846 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.85□□□□□ -0.03
NrlP54846 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.85□□□□□ -0.03
NrlP54846 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NrlP54846 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NrlP54846 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
NrlP54846 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NrlP54846 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NrlP54846 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
NrlP54846 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NrlP54846 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NrlP54846 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.85□□□□□ -0.03
NrlP54846 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NrlP54846 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.85□□□□□ -0.03
NrlP54846 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.85□□□□□ -0.03
NrlP54846 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
NrlP54846 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NrlP54846 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NrlP54846 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
NrlP54846 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NrlP54846 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NrlP54846 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
NrlP54846 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NrlP54846 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.84□□□□□ -0.03
NrlP54846 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.84□□□□□ -0.03
NrlP54846 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NrlP54846 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NrlP54846 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NrlP54846 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.84□□□□□ -0.03
NrlP54846 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NrlP54846 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.84□□□□□ -0.03
NrlP54846 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NrlP54846 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.84□□□□□ -0.03
NrlP54846 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NrlP54846 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.84□□□□□ -0.03
NrlP54846 Gm44608-201ENSMUST00000206827 855 ntBASIC14.84□□□□□ -0.03
NrlP54846 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.84□□□□□ -0.03
NrlP54846 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NrlP54846 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NrlP54846 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NrlP54846 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NrlP54846 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NrlP54846 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NrlP54846 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NrlP54846 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NrlP54846 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
NrlP54846 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NrlP54846 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
NrlP54846 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NrlP54846 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
NrlP54846 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NrlP54846 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NrlP54846 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NrlP54846 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.03
NrlP54846 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
NrlP54846 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
NrlP54846 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.83□□□□□ -0.03
NrlP54846 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
NrlP54846 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.83□□□□□ -0.04
NrlP54846 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NrlP54846 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.83□□□□□ -0.04
NrlP54846 Gm15240-201ENSMUST00000118156 720 ntBASIC14.83□□□□□ -0.04
NrlP54846 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NrlP54846 Gm18905-201ENSMUST00000205454 928 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms