Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.04■□□□□ -0
Nub1P54729 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
Nub1P54729 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.04■□□□□ -0
Nub1P54729 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Gm9229-201ENSMUST00000222777 126 ntBASIC15.04■□□□□ -0
Nub1P54729 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nub1P54729 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.03■□□□□ -0
Nub1P54729 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Nub1P54729 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nub1P54729 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Nub1P54729 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nub1P54729 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nub1P54729 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nub1P54729 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nub1P54729 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Nub1P54729 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nub1P54729 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.03■□□□□ -0
Nub1P54729 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nub1P54729 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Nub1P54729 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.03■□□□□ -0
Nub1P54729 Gm33320-201ENSMUST00000192232 530 ntBASIC15.03■□□□□ -0
Nub1P54729 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Nub1P54729 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nub1P54729 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nub1P54729 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nub1P54729 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Nub1P54729 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nub1P54729 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nub1P54729 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nub1P54729 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nub1P54729 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nub1P54729 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nub1P54729 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Nub1P54729 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nub1P54729 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nub1P54729 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Nub1P54729 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nub1P54729 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.02■□□□□ -0
Nub1P54729 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
Nub1P54729 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nub1P54729 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nub1P54729 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.02■□□□□ -0
Nub1P54729 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nub1P54729 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nub1P54729 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Nub1P54729 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Nub1P54729 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nub1P54729 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Nub1P54729 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Nub1P54729 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nub1P54729 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nub1P54729 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nub1P54729 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.02■□□□□ -0
Nub1P54729 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nub1P54729 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.02■□□□□ -0
Nub1P54729 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nub1P54729 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.02■□□□□ -0
Nub1P54729 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nub1P54729 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nub1P54729 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.02■□□□□ -0
Nub1P54729 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nub1P54729 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nub1P54729 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nub1P54729 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Nub1P54729 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nub1P54729 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nub1P54729 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Nub1P54729 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nub1P54729 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Nub1P54729 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nub1P54729 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nub1P54729 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nub1P54729 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Nub1P54729 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms