Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Atxn1P54254 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Atxn1P54254 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Atxn1P54254 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.87□□□□□ -0.19
Atxn1P54254 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Atxn1P54254 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Atxn1P54254 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Atxn1P54254 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Atxn1P54254 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Atxn1P54254 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Gm15236-201ENSMUST00000117309 379 ntBASIC13.86□□□□□ -0.19
Atxn1P54254 Gm16570-201ENSMUST00000161951 436 ntBASIC13.86□□□□□ -0.19
Atxn1P54254 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.86□□□□□ -0.19
Atxn1P54254 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.86□□□□□ -0.19
Atxn1P54254 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.86□□□□□ -0.19
Atxn1P54254 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.86□□□□□ -0.19
Atxn1P54254 Gm26461-201ENSMUST00000175064 290 ntBASIC13.86□□□□□ -0.19
Atxn1P54254 Gm33320-201ENSMUST00000192232 530 ntBASIC13.86□□□□□ -0.19
Atxn1P54254 Gm3786-201ENSMUST00000202659 378 ntBASIC13.86□□□□□ -0.19
Atxn1P54254 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Atxn1P54254 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.86□□□□□ -0.19
Atxn1P54254 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atxn1P54254 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Atxn1P54254 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atxn1P54254 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atxn1P54254 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.85□□□□□ -0.19
Atxn1P54254 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atxn1P54254 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atxn1P54254 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atxn1P54254 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Atxn1P54254 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atxn1P54254 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atxn1P54254 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.85□□□□□ -0.19
Atxn1P54254 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atxn1P54254 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atxn1P54254 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atxn1P54254 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
Atxn1P54254 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.85□□□□□ -0.19
Atxn1P54254 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.85□□□□□ -0.19
Atxn1P54254 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.85□□□□□ -0.19
Atxn1P54254 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.85□□□□□ -0.19
Atxn1P54254 Gm5279-201ENSMUST00000199575 745 ntBASIC13.85□□□□□ -0.19
Atxn1P54254 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Atxn1P54254 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atxn1P54254 Gm7561-201ENSMUST00000211203 886 ntBASIC13.85□□□□□ -0.19
Atxn1P54254 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.85□□□□□ -0.19
Atxn1P54254 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atxn1P54254 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.85□□□□□ -0.19
Atxn1P54254 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atxn1P54254 Gm6091-201ENSMUST00000098307 165 ntBASIC13.85□□□□□ -0.19
Atxn1P54254 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Atxn1P54254 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Atxn1P54254 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Atxn1P54254 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atxn1P54254 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.85□□□□□ -0.19
Atxn1P54254 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atxn1P54254 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.85□□□□□ -0.19
Atxn1P54254 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atxn1P54254 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
Atxn1P54254 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Atxn1P54254 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atxn1P54254 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Atxn1P54254 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atxn1P54254 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atxn1P54254 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atxn1P54254 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atxn1P54254 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atxn1P54254 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.84□□□□□ -0.19
Atxn1P54254 Gm14723-201ENSMUST00000118686 215 ntBASIC13.84□□□□□ -0.19
Atxn1P54254 Gm12134-201ENSMUST00000122109 520 ntBASIC13.84□□□□□ -0.19
Atxn1P54254 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Atxn1P54254 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Atxn1P54254 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atxn1P54254 Gm27847-201ENSMUST00000183711 107 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms