Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox3P53784 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox3P53784 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.4□□□□□ -0.26
Sox3P53784 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox3P53784 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox3P53784 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox3P53784 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox3P53784 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.4□□□□□ -0.26
Sox3P53784 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox3P53784 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox3P53784 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox3P53784 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.4□□□□□ -0.26
Sox3P53784 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox3P53784 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox3P53784 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sox3P53784 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox3P53784 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox3P53784 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox3P53784 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox3P53784 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.39□□□□□ -0.27
Sox3P53784 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Sox3P53784 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Sox3P53784 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox3P53784 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox3P53784 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sox3P53784 Gm9522-201ENSMUST00000182394 926 ntBASIC13.39□□□□□ -0.27
Sox3P53784 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox3P53784 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox3P53784 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.39□□□□□ -0.27
Sox3P53784 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox3P53784 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox3P53784 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox3P53784 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox3P53784 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox3P53784 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox3P53784 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.38□□□□□ -0.27
Sox3P53784 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox3P53784 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Sox3P53784 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sox3P53784 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox3P53784 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox3P53784 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox3P53784 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.38□□□□□ -0.27
Sox3P53784 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.38□□□□□ -0.27
Sox3P53784 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.38□□□□□ -0.27
Sox3P53784 Mir1897-201ENSMUST00000122581 272 ntBASIC13.38□□□□□ -0.27
Sox3P53784 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.38□□□□□ -0.27
Sox3P53784 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Sox3P53784 Gm3436-201ENSMUST00000179930 840 ntBASIC13.38□□□□□ -0.27
Sox3P53784 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.38□□□□□ -0.27
Sox3P53784 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.38□□□□□ -0.27
Sox3P53784 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.38□□□□□ -0.27
Sox3P53784 Gm46209-201ENSMUST00000217912 553 ntBASIC13.38□□□□□ -0.27
Sox3P53784 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.38□□□□□ -0.27
Sox3P53784 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.38□□□□□ -0.27
Sox3P53784 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox3P53784 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox3P53784 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.38□□□□□ -0.27
Sox3P53784 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox3P53784 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.38□□□□□ -0.27
Sox3P53784 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox3P53784 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox3P53784 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox3P53784 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox3P53784 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sox3P53784 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox3P53784 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox3P53784 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.38□□□□□ -0.27
Sox3P53784 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox3P53784 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox3P53784 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox3P53784 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox3P53784 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms