Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SftpbP50405 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SftpbP50405 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SftpbP50405 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SftpbP50405 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
SftpbP50405 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SftpbP50405 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SftpbP50405 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SftpbP50405 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SftpbP50405 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SftpbP50405 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SftpbP50405 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SftpbP50405 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.29□□□□□ -0.12
SftpbP50405 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SftpbP50405 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SftpbP50405 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SftpbP50405 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SftpbP50405 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
SftpbP50405 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.29□□□□□ -0.12
SftpbP50405 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.29□□□□□ -0.12
SftpbP50405 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.29□□□□□ -0.12
SftpbP50405 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.29□□□□□ -0.12
SftpbP50405 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.29□□□□□ -0.12
SftpbP50405 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SftpbP50405 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SftpbP50405 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
SftpbP50405 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SftpbP50405 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SftpbP50405 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SftpbP50405 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SftpbP50405 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SftpbP50405 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.29□□□□□ -0.12
SftpbP50405 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SftpbP50405 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SftpbP50405 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SftpbP50405 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.29□□□□□ -0.12
SftpbP50405 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SftpbP50405 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SftpbP50405 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SftpbP50405 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SftpbP50405 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SftpbP50405 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SftpbP50405 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SftpbP50405 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SftpbP50405 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SftpbP50405 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SftpbP50405 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SftpbP50405 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SftpbP50405 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SftpbP50405 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SftpbP50405 Gm14494-201ENSMUST00000118786 435 ntBASIC14.28□□□□□ -0.12
SftpbP50405 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.28□□□□□ -0.12
SftpbP50405 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SftpbP50405 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SftpbP50405 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SftpbP50405 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.28□□□□□ -0.12
SftpbP50405 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SftpbP50405 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.28□□□□□ -0.12
SftpbP50405 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SftpbP50405 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.28□□□□□ -0.12
SftpbP50405 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.28□□□□□ -0.12
SftpbP50405 Gm18057-201ENSMUST00000208220 503 ntBASIC14.28□□□□□ -0.12
SftpbP50405 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.28□□□□□ -0.12
SftpbP50405 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SftpbP50405 Grk6-205ENSMUST00000224653 2976 ntBASIC14.28□□□□□ -0.12
SftpbP50405 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SftpbP50405 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.28□□□□□ -0.12
SftpbP50405 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SftpbP50405 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SftpbP50405 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SftpbP50405 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SftpbP50405 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SftpbP50405 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SftpbP50405 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SftpbP50405 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SftpbP50405 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SftpbP50405 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SftpbP50405 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SftpbP50405 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SftpbP50405 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SftpbP50405 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
SftpbP50405 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.27□□□□□ -0.12
SftpbP50405 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SftpbP50405 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SftpbP50405 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SftpbP50405 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SftpbP50405 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SftpbP50405 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.27□□□□□ -0.12
SftpbP50405 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SftpbP50405 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SftpbP50405 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SftpbP50405 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SftpbP50405 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SftpbP50405 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SftpbP50405 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SftpbP50405 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SftpbP50405 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SftpbP50405 Gm11779-201ENSMUST00000118541 368 ntBASIC14.27□□□□□ -0.13
SftpbP50405 Gm2810-201ENSMUST00000118681 990 ntBASIC14.27□□□□□ -0.13
SftpbP50405 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms