Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Brca1P48754 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Brca1P48754 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Brca1P48754 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Brca1P48754 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Brca1P48754 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Brca1P48754 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.38■□□□□ 0.05
Brca1P48754 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.38■□□□□ 0.05
Brca1P48754 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Brca1P48754 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.38■□□□□ 0.05
Brca1P48754 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC15.38■□□□□ 0.05
Brca1P48754 Gm11637-201ENSMUST00000120601 592 ntBASIC15.38■□□□□ 0.05
Brca1P48754 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC15.38■□□□□ 0.05
Brca1P48754 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Brca1P48754 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.38■□□□□ 0.05
Brca1P48754 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC15.38■□□□□ 0.05
Brca1P48754 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC15.38■□□□□ 0.05
Brca1P48754 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC15.38■□□□□ 0.05
Brca1P48754 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Brca1P48754 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Brca1P48754 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Brca1P48754 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Brca1P48754 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Brca1P48754 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Brca1P48754 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Brca1P48754 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.38■□□□□ 0.05
Brca1P48754 Gm9333-201ENSMUST00000205452 1323 ntBASIC15.37■□□□□ 0.05
Brca1P48754 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Brca1P48754 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Brca1P48754 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Brca1P48754 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Brca1P48754 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Brca1P48754 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Brca1P48754 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Brca1P48754 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Brca1P48754 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.37■□□□□ 0.05
Brca1P48754 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Brca1P48754 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Brca1P48754 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Brca1P48754 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Brca1P48754 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Brca1P48754 Gm24990-201ENSMUST00000157406 323 ntBASIC15.37■□□□□ 0.05
Brca1P48754 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.37■□□□□ 0.05
Brca1P48754 Gm37986-201ENSMUST00000193285 383 ntBASIC15.37■□□□□ 0.05
Brca1P48754 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC15.37■□□□□ 0.05
Brca1P48754 Abhd11os-203ENSMUST00000222613 363 ntBASIC15.37■□□□□ 0.05
Brca1P48754 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Brca1P48754 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Brca1P48754 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Brca1P48754 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.37■□□□□ 0.05
Brca1P48754 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Brca1P48754 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.36■□□□□ 0.05
Brca1P48754 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Gm11222-201ENSMUST00000119005 738 ntBASIC15.36■□□□□ 0.05
Brca1P48754 Gm11591-201ENSMUST00000120063 702 ntBASIC15.36■□□□□ 0.05
Brca1P48754 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Mir6979-201ENSMUST00000183927 56 ntBASIC15.36■□□□□ 0.05
Brca1P48754 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Brca1P48754 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.36■□□□□ 0.05
Brca1P48754 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Brca1P48754 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Brca1P48754 Gm24830-201ENSMUST00000102024 166 ntBASIC15.36■□□□□ 0.05
Brca1P48754 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Gm25732-201ENSMUST00000175168 60 ntBASIC15.36■□□□□ 0.05
Brca1P48754 Gm25890-201ENSMUST00000177643 165 ntBASIC15.36■□□□□ 0.05
Brca1P48754 Rnu1b2-201ENSMUST00000178073 165 ntBASIC15.36■□□□□ 0.05
Brca1P48754 Rnu1b1-201ENSMUST00000178250 165 ntBASIC15.36■□□□□ 0.05
Brca1P48754 Gm22614-201ENSMUST00000178300 165 ntBASIC15.36■□□□□ 0.05
Brca1P48754 Gm5896-201ENSMUST00000189662 1024 ntBASIC15.36■□□□□ 0.05
Brca1P48754 Gm28693-202ENSMUST00000190758 331 ntBASIC15.36■□□□□ 0.05
Brca1P48754 Gm37489-201ENSMUST00000191883 159 ntBASIC15.36■□□□□ 0.05
Brca1P48754 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.36■□□□□ 0.05
Brca1P48754 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.36■□□□□ 0.05
Brca1P48754 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Brca1P48754 Gm22042-201ENSMUST00000082989 165 ntBASIC15.36■□□□□ 0.05
Brca1P48754 Gm26232-201ENSMUST00000083360 166 ntBASIC15.36■□□□□ 0.05
Brca1P48754 Gm24136-201ENSMUST00000083374 165 ntBASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms