Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4bP46467 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vps4bP46467 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4bP46467 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.18□□□□□ -0.14
Vps4bP46467 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4bP46467 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4bP46467 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.18□□□□□ -0.14
Vps4bP46467 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4bP46467 AA543401-201ENSMUST00000164248 1269 ntBASIC14.18□□□□□ -0.14
Vps4bP46467 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4bP46467 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.18□□□□□ -0.14
Vps4bP46467 Gm27321-201ENSMUST00000185021 205 ntBASIC14.18□□□□□ -0.14
Vps4bP46467 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.18□□□□□ -0.14
Vps4bP46467 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Vps4bP46467 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Vps4bP46467 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.18□□□□□ -0.14
Vps4bP46467 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.18□□□□□ -0.14
Vps4bP46467 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.18□□□□□ -0.14
Vps4bP46467 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.18□□□□□ -0.14
Vps4bP46467 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4bP46467 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.18□□□□□ -0.14
Vps4bP46467 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4bP46467 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4bP46467 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4bP46467 BC001981-202ENSMUST00000191393 1545 ntBASIC14.18□□□□□ -0.14
Vps4bP46467 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4bP46467 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vps4bP46467 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vps4bP46467 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4bP46467 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4bP46467 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4bP46467 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vps4bP46467 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4bP46467 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4bP46467 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Vps4bP46467 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.17□□□□□ -0.14
Vps4bP46467 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.17□□□□□ -0.14
Vps4bP46467 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4bP46467 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4bP46467 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4bP46467 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Vps4bP46467 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4bP46467 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4bP46467 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Vps4bP46467 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4bP46467 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4bP46467 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.17□□□□□ -0.14
Vps4bP46467 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.17□□□□□ -0.14
Vps4bP46467 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Vps4bP46467 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.17□□□□□ -0.14
Vps4bP46467 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4bP46467 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4bP46467 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4bP46467 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4bP46467 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Vps4bP46467 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Vps4bP46467 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4bP46467 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4bP46467 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4bP46467 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.17□□□□□ -0.14
Vps4bP46467 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Vps4bP46467 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4bP46467 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Vps4bP46467 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4bP46467 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4bP46467 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4bP46467 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.16□□□□□ -0.14
Vps4bP46467 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.16□□□□□ -0.14
Vps4bP46467 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.16□□□□□ -0.14
Vps4bP46467 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4bP46467 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4bP46467 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4bP46467 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4bP46467 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4bP46467 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4bP46467 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4bP46467 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4bP46467 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4bP46467 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Vps4bP46467 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4bP46467 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Vps4bP46467 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4bP46467 Gm13823-201ENSMUST00000119930 345 ntBASIC14.16□□□□□ -0.14
Vps4bP46467 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.16□□□□□ -0.14
Vps4bP46467 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4bP46467 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Vps4bP46467 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4bP46467 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Vps4bP46467 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Vps4bP46467 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4bP46467 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.16□□□□□ -0.14
Vps4bP46467 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4bP46467 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Vps4bP46467 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.16□□□□□ -0.14
Vps4bP46467 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4bP46467 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4bP46467 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4bP46467 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4bP46467 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vps4bP46467 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms