Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Nkx2-6P43688 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-6P43688 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-6P43688 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-6P43688 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-6P43688 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx2-6P43688 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.3
Nkx2-6P43688 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx2-6P43688 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx2-6P43688 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx2-6P43688 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx2-6P43688 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx2-6P43688 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Nkx2-6P43688 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx2-6P43688 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx2-6P43688 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx2-6P43688 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx2-6P43688 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Nkx2-6P43688 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.2□□□□□ -0.3
Nkx2-6P43688 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.2□□□□□ -0.3
Nkx2-6P43688 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Gm13829-201ENSMUST00000119600 138 ntBASIC13.2□□□□□ -0.3
Nkx2-6P43688 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Gm37714-201ENSMUST00000194742 342 ntBASIC13.2□□□□□ -0.3
Nkx2-6P43688 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Gm18905-201ENSMUST00000205454 928 ntBASIC13.2□□□□□ -0.3
Nkx2-6P43688 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.2□□□□□ -0.3
Nkx2-6P43688 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-6P43688 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.19□□□□□ -0.3
Nkx2-6P43688 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.19□□□□□ -0.3
Nkx2-6P43688 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.19□□□□□ -0.3
Nkx2-6P43688 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Gm8602-201ENSMUST00000184045 607 ntBASIC13.19□□□□□ -0.3
Nkx2-6P43688 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nkx2-6P43688 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms