Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.49□□□□□ -0.25
Tnfsf4P43488 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf4P43488 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Tnfsf4P43488 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.48□□□□□ -0.25
Tnfsf4P43488 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.48□□□□□ -0.25
Tnfsf4P43488 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.48□□□□□ -0.25
Tnfsf4P43488 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf4P43488 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Gm2445-201ENSMUST00000182798 989 ntBASIC13.47□□□□□ -0.25
Tnfsf4P43488 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.47□□□□□ -0.25
Tnfsf4P43488 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.47□□□□□ -0.25
Tnfsf4P43488 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf4P43488 BC001981-202ENSMUST00000191393 1545 ntBASIC13.47□□□□□ -0.25
Tnfsf4P43488 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf4P43488 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.47□□□□□ -0.25
Tnfsf4P43488 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf4P43488 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf4P43488 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfsf4P43488 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfsf4P43488 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfsf4P43488 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.46□□□□□ -0.25
Tnfsf4P43488 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfsf4P43488 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfsf4P43488 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfsf4P43488 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfsf4P43488 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfsf4P43488 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfsf4P43488 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfsf4P43488 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfsf4P43488 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfsf4P43488 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfsf4P43488 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfsf4P43488 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.46□□□□□ -0.25
Tnfsf4P43488 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfsf4P43488 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfsf4P43488 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.46□□□□□ -0.25
Tnfsf4P43488 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfsf4P43488 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms