Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Gm15427-201ENSMUST00000117288 531 ntBASIC11.81□□□□□ -0.52
Hist1h1dP43277 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.81□□□□□ -0.52
Hist1h1dP43277 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.81□□□□□ -0.52
Hist1h1dP43277 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Gm18737-201ENSMUST00000173594 937 ntBASIC11.81□□□□□ -0.52
Hist1h1dP43277 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Gm44492-201ENSMUST00000197012 141 ntBASIC11.81□□□□□ -0.52
Hist1h1dP43277 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.81□□□□□ -0.52
Hist1h1dP43277 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.81□□□□□ -0.52
Hist1h1dP43277 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.81□□□□□ -0.52
Hist1h1dP43277 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.81□□□□□ -0.52
Hist1h1dP43277 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.81□□□□□ -0.52
Hist1h1dP43277 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Gm10819-201ENSMUST00000099988 561 ntBASIC11.81□□□□□ -0.52
Hist1h1dP43277 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.81□□□□□ -0.52
Hist1h1dP43277 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1dP43277 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h1dP43277 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.81□□□□□ -0.52
Hist1h1dP43277 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.8□□□□□ -0.52
Hist1h1dP43277 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hist1h1dP43277 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.8□□□□□ -0.52
Hist1h1dP43277 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Hist1h1dP43277 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.8□□□□□ -0.52
Hist1h1dP43277 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1dP43277 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.8□□□□□ -0.52
Hist1h1dP43277 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h1dP43277 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.79□□□□□ -0.52
Hist1h1dP43277 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h1dP43277 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h1dP43277 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h1dP43277 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.79□□□□□ -0.52
Hist1h1dP43277 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h1dP43277 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h1dP43277 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h1dP43277 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h1dP43277 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h1dP43277 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h1dP43277 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h1dP43277 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h1dP43277 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Hist1h1dP43277 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Hist1h1dP43277 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h1dP43277 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h1dP43277 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h1dP43277 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms