Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hist1h1aP43275 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hist1h1aP43275 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Gm8584-201ENSMUST00000171982 758 ntBASIC11.54□□□□□ -0.56
Hist1h1aP43275 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Hist1h1aP43275 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1aP43275 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.53□□□□□ -0.56
Hist1h1aP43275 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1aP43275 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.53□□□□□ -0.56
Hist1h1aP43275 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1aP43275 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Gm9385-201ENSMUST00000117563 472 ntBASIC11.53□□□□□ -0.56
Hist1h1aP43275 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.53□□□□□ -0.56
Hist1h1aP43275 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.53□□□□□ -0.56
Hist1h1aP43275 Gm15483-201ENSMUST00000120338 456 ntBASIC11.53□□□□□ -0.56
Hist1h1aP43275 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.53□□□□□ -0.56
Hist1h1aP43275 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Gm45747-201ENSMUST00000212203 999 ntBASIC11.53□□□□□ -0.56
Hist1h1aP43275 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.53□□□□□ -0.56
Hist1h1aP43275 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.53□□□□□ -0.56
Hist1h1aP43275 Mzt1-203ENSMUST00000227948 952 ntBASIC11.53□□□□□ -0.56
Hist1h1aP43275 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Hist1h1aP43275 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hist1h1aP43275 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hist1h1aP43275 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hist1h1aP43275 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hist1h1aP43275 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hist1h1aP43275 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Hist1h1aP43275 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.52□□□□□ -0.56
Hist1h1aP43275 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hist1h1aP43275 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hist1h1aP43275 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.52□□□□□ -0.57
Hist1h1aP43275 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hist1h1aP43275 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hist1h1aP43275 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms