Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl12P40224 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl12P40224 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.28□□□□□ -0.12
Cxcl12P40224 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl12P40224 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.28□□□□□ -0.12
Cxcl12P40224 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl12P40224 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl12P40224 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl12P40224 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl12P40224 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl12P40224 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl12P40224 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl12P40224 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cxcl12P40224 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl12P40224 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl12P40224 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cxcl12P40224 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl12P40224 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cxcl12P40224 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl12P40224 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl12P40224 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl12P40224 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cxcl12P40224 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cxcl12P40224 BC037039-201ENSMUST00000192003 2205 ntBASIC14.27□□□□□ -0.12
Cxcl12P40224 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcl12P40224 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcl12P40224 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cxcl12P40224 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcl12P40224 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcl12P40224 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.27□□□□□ -0.12
Cxcl12P40224 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcl12P40224 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.27□□□□□ -0.12
Cxcl12P40224 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcl12P40224 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcl12P40224 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl12P40224 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl12P40224 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Cxcl12P40224 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.27□□□□□ -0.13
Cxcl12P40224 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.27□□□□□ -0.13
Cxcl12P40224 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl12P40224 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl12P40224 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.27□□□□□ -0.13
Cxcl12P40224 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl12P40224 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl12P40224 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl12P40224 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl12P40224 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl12P40224 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Cxcl12P40224 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl12P40224 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl12P40224 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl12P40224 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl12P40224 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl12P40224 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl12P40224 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl12P40224 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl12P40224 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.26□□□□□ -0.13
Cxcl12P40224 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.26□□□□□ -0.13
Cxcl12P40224 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.26□□□□□ -0.13
Cxcl12P40224 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl12P40224 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl12P40224 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl12P40224 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl12P40224 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl12P40224 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Cxcl12P40224 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cxcl12P40224 Gm13297-201ENSMUST00000120205 934 ntBASIC14.26□□□□□ -0.13
Cxcl12P40224 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.26□□□□□ -0.13
Cxcl12P40224 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl12P40224 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl12P40224 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.26□□□□□ -0.13
Cxcl12P40224 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.26□□□□□ -0.13
Cxcl12P40224 Rps4l-202ENSMUST00000204242 789 ntBASIC14.26□□□□□ -0.13
Cxcl12P40224 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Cxcl12P40224 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.26□□□□□ -0.13
Cxcl12P40224 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl12P40224 Gm10146-201ENSMUST00000072739 309 ntBASIC14.26□□□□□ -0.13
Cxcl12P40224 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.26□□□□□ -0.13
Cxcl12P40224 Gm26315-201ENSMUST00000083890 321 ntBASIC14.26□□□□□ -0.13
Cxcl12P40224 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl12P40224 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl12P40224 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl12P40224 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl12P40224 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl12P40224 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl12P40224 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cxcl12P40224 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl12P40224 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl12P40224 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cxcl12P40224 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.26□□□□□ -0.13
Cxcl12P40224 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl12P40224 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl12P40224 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl12P40224 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cxcl12P40224 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl12P40224 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl12P40224 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl12P40224 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cxcl12P40224 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl12P40224 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms