Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.92□□□□□ -0.18
LdlrP35951 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
LdlrP35951 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LdlrP35951 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
LdlrP35951 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LdlrP35951 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.91□□□□□ -0.18
LdlrP35951 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LdlrP35951 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LdlrP35951 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.91□□□□□ -0.18
LdlrP35951 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LdlrP35951 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LdlrP35951 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LdlrP35951 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LdlrP35951 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LdlrP35951 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
LdlrP35951 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.91□□□□□ -0.18
LdlrP35951 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LdlrP35951 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LdlrP35951 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LdlrP35951 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LdlrP35951 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LdlrP35951 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LdlrP35951 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LdlrP35951 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LdlrP35951 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LdlrP35951 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.91□□□□□ -0.18
LdlrP35951 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.91□□□□□ -0.18
LdlrP35951 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LdlrP35951 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.91□□□□□ -0.18
LdlrP35951 Gm27622-201ENSMUST00000183779 60 ntBASIC13.91□□□□□ -0.18
LdlrP35951 Gm10253-201ENSMUST00000194270 940 ntBASIC13.91□□□□□ -0.18
LdlrP35951 Gm7774-201ENSMUST00000200064 533 ntBASIC13.91□□□□□ -0.18
LdlrP35951 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.91□□□□□ -0.18
LdlrP35951 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LdlrP35951 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
LdlrP35951 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LdlrP35951 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LdlrP35951 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LdlrP35951 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.91□□□□□ -0.18
LdlrP35951 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LdlrP35951 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LdlrP35951 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LdlrP35951 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LdlrP35951 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LdlrP35951 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LdlrP35951 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
LdlrP35951 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LdlrP35951 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LdlrP35951 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.9□□□□□ -0.18
LdlrP35951 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Gm9385-201ENSMUST00000117563 472 ntBASIC13.9□□□□□ -0.18
LdlrP35951 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.9□□□□□ -0.18
LdlrP35951 Gm18057-201ENSMUST00000208220 503 ntBASIC13.9□□□□□ -0.18
LdlrP35951 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.9□□□□□ -0.18
LdlrP35951 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.9□□□□□ -0.18
LdlrP35951 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
LdlrP35951 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LdlrP35951 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LdlrP35951 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LdlrP35951 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
LdlrP35951 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
LdlrP35951 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LdlrP35951 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LdlrP35951 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LdlrP35951 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
LdlrP35951 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LdlrP35951 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LdlrP35951 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LdlrP35951 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LdlrP35951 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LdlrP35951 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LdlrP35951 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LdlrP35951 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
LdlrP35951 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LdlrP35951 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LdlrP35951 Gm25287-201ENSMUST00000103846 110 ntBASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms