Protein–RNA interactions for Protein: P35821

Ptpn1, Tyrosine-protein phosphatase non-receptor type 1, mousemouse

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn1P35821 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.27□□□□□ -0.12
Ptpn1P35821 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ptpn1P35821 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ptpn1P35821 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ptpn1P35821 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ptpn1P35821 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ptpn1P35821 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.27□□□□□ -0.13
Ptpn1P35821 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ptpn1P35821 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ptpn1P35821 Gm14767-201ENSMUST00000121559 586 ntBASIC14.27□□□□□ -0.13
Ptpn1P35821 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.27□□□□□ -0.13
Ptpn1P35821 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.27□□□□□ -0.13
Ptpn1P35821 Gm33320-201ENSMUST00000192232 530 ntBASIC14.27□□□□□ -0.13
Ptpn1P35821 Gm44872-201ENSMUST00000207864 420 ntBASIC14.27□□□□□ -0.13
Ptpn1P35821 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptpn1P35821 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptpn1P35821 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptpn1P35821 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptpn1P35821 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptpn1P35821 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptpn1P35821 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Ptpn1P35821 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ptpn1P35821 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.27□□□□□ -0.13
Ptpn1P35821 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptpn1P35821 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptpn1P35821 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptpn1P35821 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptpn1P35821 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ptpn1P35821 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.26□□□□□ -0.13
Ptpn1P35821 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ptpn1P35821 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Ptpn1P35821 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Ptpn1P35821 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ptpn1P35821 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ptpn1P35821 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Ptpn1P35821 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ptpn1P35821 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptpn1P35821 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptpn1P35821 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ptpn1P35821 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ptpn1P35821 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptpn1P35821 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptpn1P35821 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Ptpn1P35821 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptpn1P35821 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptpn1P35821 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Ptpn1P35821 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ptpn1P35821 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ptpn1P35821 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ptpn1P35821 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ptpn1P35821 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ptpn1P35821 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ptpn1P35821 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptpn1P35821 Gm27680-201ENSMUST00000184192 160 ntBASIC14.25□□□□□ -0.13
Ptpn1P35821 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.25□□□□□ -0.13
Ptpn1P35821 Gm43703-201ENSMUST00000200523 763 ntBASIC14.25□□□□□ -0.13
Ptpn1P35821 Gm9229-201ENSMUST00000222777 126 ntBASIC14.25□□□□□ -0.13
Ptpn1P35821 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.25□□□□□ -0.13
Ptpn1P35821 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptpn1P35821 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptpn1P35821 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptpn1P35821 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.25□□□□□ -0.13
Ptpn1P35821 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.25□□□□□ -0.13
Ptpn1P35821 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptpn1P35821 Matn2-206ENSMUST00000228570 2798 ntBASIC14.25□□□□□ -0.13
Ptpn1P35821 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ptpn1P35821 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptpn1P35821 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptpn1P35821 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptpn1P35821 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptpn1P35821 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptpn1P35821 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptpn1P35821 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.25□□□□□ -0.13
Ptpn1P35821 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ptpn1P35821 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ptpn1P35821 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms