Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.32□□□□□ -0.44
Cd28P31041 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.32□□□□□ -0.44
Cd28P31041 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cd28P31041 AV026068-213ENSMUST00000223675 1171 ntBASIC12.32□□□□□ -0.44
Cd28P31041 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd28P31041 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cd28P31041 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.32□□□□□ -0.44
Cd28P31041 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd28P31041 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cd28P31041 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cd28P31041 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd28P31041 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cd28P31041 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cd28P31041 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd28P31041 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.32□□□□□ -0.44
Cd28P31041 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd28P31041 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd28P31041 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd28P31041 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd28P31041 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd28P31041 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.32□□□□□ -0.44
Cd28P31041 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd28P31041 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd28P31041 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cd28P31041 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd28P31041 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd28P31041 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd28P31041 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Cd28P31041 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.31□□□□□ -0.44
Cd28P31041 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd28P31041 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd28P31041 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cd28P31041 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd28P31041 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd28P31041 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd28P31041 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd28P31041 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cd28P31041 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Cd28P31041 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd28P31041 Gm7153-201ENSMUST00000117092 455 ntBASIC12.31□□□□□ -0.44
Cd28P31041 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.31□□□□□ -0.44
Cd28P31041 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cd28P31041 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cd28P31041 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.31□□□□□ -0.44
Cd28P31041 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.31□□□□□ -0.44
Cd28P31041 Gm27459-201ENSMUST00000184860 107 ntBASIC12.31□□□□□ -0.44
Cd28P31041 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.31□□□□□ -0.44
Cd28P31041 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.31□□□□□ -0.44
Cd28P31041 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
Cd28P31041 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd28P31041 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd28P31041 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd28P31041 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cd28P31041 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.31□□□□□ -0.44
Cd28P31041 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd28P31041 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.31□□□□□ -0.44
Cd28P31041 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.31□□□□□ -0.44
Cd28P31041 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd28P31041 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd28P31041 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cd28P31041 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cd28P31041 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cd28P31041 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd28P31041 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd28P31041 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd28P31041 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd28P31041 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd28P31041 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.3□□□□□ -0.44
Cd28P31041 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.3□□□□□ -0.44
Cd28P31041 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cd28P31041 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd28P31041 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cd28P31041 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Cd28P31041 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd28P31041 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd28P31041 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cd28P31041 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cd28P31041 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.3□□□□□ -0.44
Cd28P31041 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd28P31041 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Cd28P31041 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd28P31041 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Cd28P31041 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd28P31041 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd28P31041 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Cd28P31041 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd28P31041 Gm16198-201ENSMUST00000118766 670 ntBASIC12.3□□□□□ -0.44
Cd28P31041 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.3□□□□□ -0.44
Cd28P31041 Gm5479-201ENSMUST00000160578 435 ntBASIC12.3□□□□□ -0.44
Cd28P31041 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cd28P31041 Gm27300-201ENSMUST00000184085 97 ntBASIC12.3□□□□□ -0.44
Cd28P31041 Gm27335-201ENSMUST00000184758 97 ntBASIC12.3□□□□□ -0.44
Cd28P31041 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.3□□□□□ -0.44
Cd28P31041 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.3□□□□□ -0.44
Cd28P31041 Gm34391-201ENSMUST00000203706 907 ntBASIC12.3□□□□□ -0.44
Cd28P31041 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.3□□□□□ -0.44
Cd28P31041 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.3□□□□□ -0.44
Cd28P31041 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.3□□□□□ -0.44
Cd28P31041 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.3□□□□□ -0.44
Cd28P31041 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms