Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VtnP29788 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VtnP29788 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VtnP29788 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VtnP29788 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VtnP29788 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
VtnP29788 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VtnP29788 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
VtnP29788 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VtnP29788 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VtnP29788 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
VtnP29788 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VtnP29788 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
VtnP29788 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
VtnP29788 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 Gm15321-201ENSMUST00000121290 288 ntBASIC12.66□□□□□ -0.38
VtnP29788 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.66□□□□□ -0.38
VtnP29788 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.66□□□□□ -0.38
VtnP29788 Gm27838-201ENSMUST00000184829 128 ntBASIC12.66□□□□□ -0.38
VtnP29788 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.66□□□□□ -0.38
VtnP29788 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.66□□□□□ -0.38
VtnP29788 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.66□□□□□ -0.38
VtnP29788 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
VtnP29788 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
VtnP29788 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.66□□□□□ -0.38
VtnP29788 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
VtnP29788 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VtnP29788 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VtnP29788 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VtnP29788 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.65□□□□□ -0.38
VtnP29788 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VtnP29788 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
VtnP29788 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VtnP29788 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VtnP29788 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VtnP29788 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VtnP29788 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VtnP29788 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VtnP29788 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VtnP29788 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VtnP29788 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.65□□□□□ -0.38
VtnP29788 Gm15460-201ENSMUST00000118147 391 ntBASIC12.65□□□□□ -0.38
VtnP29788 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
VtnP29788 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.65□□□□□ -0.38
VtnP29788 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VtnP29788 Gm29667-201ENSMUST00000190817 490 ntBASIC12.65□□□□□ -0.38
VtnP29788 Gm43703-201ENSMUST00000200523 763 ntBASIC12.65□□□□□ -0.38
VtnP29788 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.65□□□□□ -0.38
VtnP29788 Gm18027-201ENSMUST00000218947 619 ntBASIC12.65□□□□□ -0.38
VtnP29788 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VtnP29788 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VtnP29788 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VtnP29788 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VtnP29788 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VtnP29788 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VtnP29788 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VtnP29788 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.65□□□□□ -0.38
VtnP29788 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.65□□□□□ -0.38
VtnP29788 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VtnP29788 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VtnP29788 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
VtnP29788 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.65□□□□□ -0.38
VtnP29788 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VtnP29788 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
VtnP29788 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
VtnP29788 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
VtnP29788 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.64□□□□□ -0.39
VtnP29788 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VtnP29788 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VtnP29788 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VtnP29788 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VtnP29788 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.64□□□□□ -0.39
VtnP29788 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VtnP29788 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms