Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Ccl6P27784 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC10.9□□□□□ -0.66
Ccl6P27784 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Ccl6P27784 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Ccl6P27784 Gm6222-201ENSMUST00000120787 396 ntBASIC10.9□□□□□ -0.66
Ccl6P27784 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC10.9□□□□□ -0.66
Ccl6P27784 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC10.9□□□□□ -0.66
Ccl6P27784 Gm18766-201ENSMUST00000189811 808 ntBASIC10.9□□□□□ -0.66
Ccl6P27784 Gm7774-201ENSMUST00000200064 533 ntBASIC10.9□□□□□ -0.66
Ccl6P27784 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 AC123645.1-201ENSMUST00000228469 605 ntBASIC10.9□□□□□ -0.66
Ccl6P27784 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC10.9□□□□□ -0.66
Ccl6P27784 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Ccl6P27784 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC10.9□□□□□ -0.67
Ccl6P27784 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ccl6P27784 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ccl6P27784 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC10.9□□□□□ -0.67
Ccl6P27784 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ccl6P27784 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ccl6P27784 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ccl6P27784 AC115735.4-201ENSMUST00000227460 1944 ntBASIC10.9□□□□□ -0.67
Ccl6P27784 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Ccl6P27784 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Ccl6P27784 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Ccl6P27784 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Ccl6P27784 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Ccl6P27784 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.89□□□□□ -0.67
Ccl6P27784 Gm29541-201ENSMUST00000191351 678 ntBASIC10.89□□□□□ -0.67
Ccl6P27784 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC10.89□□□□□ -0.67
Ccl6P27784 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Ccl6P27784 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Ccl6P27784 Matn2-206ENSMUST00000228570 2798 ntBASIC10.89□□□□□ -0.67
Ccl6P27784 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC10.89□□□□□ -0.67
Ccl6P27784 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC10.89□□□□□ -0.67
Ccl6P27784 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC10.89□□□□□ -0.67
Ccl6P27784 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.89□□□□□ -0.67
Ccl6P27784 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Ccl6P27784 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl6P27784 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl6P27784 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl6P27784 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl6P27784 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl6P27784 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ccl6P27784 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl6P27784 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl6P27784 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl6P27784 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl6P27784 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl6P27784 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Ccl6P27784 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl6P27784 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl6P27784 Gm25287-201ENSMUST00000103846 110 ntBASIC10.88□□□□□ -0.67
Ccl6P27784 Gm22918-201ENSMUST00000103855 110 ntBASIC10.88□□□□□ -0.67
Ccl6P27784 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC10.88□□□□□ -0.67
Ccl6P27784 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl6P27784 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms