Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.91□□□□□ -0.34
Cd40lgP27548 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.91□□□□□ -0.34
Cd40lgP27548 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cd40lgP27548 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm14057-201ENSMUST00000120631 482 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cd40lgP27548 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm29310-201ENSMUST00000185468 696 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm21825-201ENSMUST00000185728 696 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm29109-201ENSMUST00000185895 696 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm21896-201ENSMUST00000186520 696 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm21873-201ENSMUST00000186728 696 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm21794-201ENSMUST00000187056 696 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm21880-201ENSMUST00000187275 696 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm21826-201ENSMUST00000187451 696 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm21198-201ENSMUST00000188393 696 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm21749-201ENSMUST00000189343 696 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm21901-201ENSMUST00000189568 696 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm29424-201ENSMUST00000189716 696 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm28599-201ENSMUST00000189838 694 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm21867-201ENSMUST00000189917 696 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm29269-201ENSMUST00000190087 696 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm21722-201ENSMUST00000190153 696 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm28423-201ENSMUST00000190701 696 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm21899-201ENSMUST00000190745 696 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm21910-201ENSMUST00000191163 696 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm21849-201ENSMUST00000191571 696 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm28678-201ENSMUST00000191593 696 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm20910-201ENSMUST00000193268 696 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm21871-201ENSMUST00000194621 696 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.91□□□□□ -0.34
Cd40lgP27548 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cd40lgP27548 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.91□□□□□ -0.34
Cd40lgP27548 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40lgP27548 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Cd40lgP27548 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40lgP27548 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40lgP27548 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40lgP27548 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40lgP27548 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40lgP27548 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40lgP27548 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.9□□□□□ -0.34
Cd40lgP27548 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40lgP27548 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Cd40lgP27548 Efs-202ENSMUST00000227037 2540 ntBASIC12.9□□□□□ -0.34
Cd40lgP27548 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cd40lgP27548 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Cd40lgP27548 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40lgP27548 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40lgP27548 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40lgP27548 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40lgP27548 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.9□□□□□ -0.34
Cd40lgP27548 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.9□□□□□ -0.34
Cd40lgP27548 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40lgP27548 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Cd40lgP27548 Gm13453-201ENSMUST00000118708 357 ntBASIC12.9□□□□□ -0.34
Cd40lgP27548 Gm14767-201ENSMUST00000121559 586 ntBASIC12.9□□□□□ -0.34
Cd40lgP27548 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.9□□□□□ -0.34
Cd40lgP27548 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.9□□□□□ -0.34
Cd40lgP27548 Mir7023-201ENSMUST00000185093 64 ntBASIC12.9□□□□□ -0.34
Cd40lgP27548 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40lgP27548 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40lgP27548 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40lgP27548 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40lgP27548 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40lgP27548 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40lgP27548 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40lgP27548 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40lgP27548 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Cd40lgP27548 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Cd40lgP27548 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cd40lgP27548 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.35
Cd40lgP27548 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.9□□□□□ -0.35
Cd40lgP27548 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cd40lgP27548 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cd40lgP27548 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cd40lgP27548 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms